RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ITGALP20701 1170 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 EEF1B2P24534 225 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 GZMMP51124 257 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 MAPK10P53779 464 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 CDH18Q13634 790 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 C16orf72Q14CZ0 275 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 PON2Q15165 354 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 XKR5Q6UX68 686 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 R3HCC1LQ7Z5L2 792 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 CHPFQ8IZ52 775 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 GLB1L3Q8NCI6 653 aaPredicted RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 OR52E4Q8NGH9 312 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 SNX19Q92543 992 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 ACDQ96AP0 544 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 MTFMTQ96DP5 389 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 SLC47A1Q96FL8 570 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 CNDP2Q96KP4 475 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 OR52E6Q96RD3 313 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 ZBTB18Q99592 522 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 ACPTQ9BZG2 426 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 PAIP1Q9H074 479 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 ACTR8Q9H981 624 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 ASIC5Q9NY37 505 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 TRPS1Q9UHF7 1281 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 PCDHB14Q9Y5E9 798 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 GMEB1Q9Y692 573 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 MYOFQ9NZM1 2061 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 AGAP14A8MT82 685 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 GSTA4O15217 222 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 PFDN1O60925 122 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 WDR47O94967 919 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 EPB42P16452 691 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 PTPN6P29350 595 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 NRIP1P48552 1158 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 ALDH7A1P49419 539 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 SP3Q02447 781 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 MAD2L1Q13257 205 aaPredicted RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 CTU2Q2VPK5 515 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 SLC44A4Q53GD3 710 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 GTF2IRD2BQ6EKJ0 949 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 ANKRD26P1Q6NSI1 321 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 Q6ZNB5 142 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 GCNT7Q6ZNI0 430 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 DNAJB7Q7Z6W7 309 aaPredicted RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 GTF2IRD2Q86UP8 949 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 CALHM3Q86XJ0 350 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 NXPE1Q8N323 547 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 HJURPQ8NCD3 748 aaPredicted RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 GPR26Q8NDV2 337 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 CSF3RQ99062 836 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 HTATIP2Q9BUP3 242 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 LHPPQ9H008 270 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 ING2Q9H160 280 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 RDH14Q9HBH5 336 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 LATS2Q9NRM7 1088 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 DCAF13Q9NV06 445 aaKnown RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 RHBDL2Q9NX52 303 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 SRRDQ9UH36 339 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 MBD1Q9UIS9 605 aaPredicted RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 FAF1Q9UNN5 650 aaPredicted RBP10.69□□□□□ -0.7
BEST1-201ENST00000378043 INVSQ9Y283 1065 aa10.69□□□□□ -0.7
BEST1-201ENST00000378043 NPIPB15A6NHN6 443 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 GMNNO75496 209 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ZNF182P17025 639 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 HOXB9P17482 250 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 PRKACGP22612 351 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 BCL2L1Q07817 233 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 BNIP3Q12983 259 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 KCNAB2Q13303 367 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 TMED1Q13445 227 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ARHGEF7Q14155 803 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 CPSF6Q16630 551 aaKnown RBP eCLIP10.68□□□□□ -0.7
BEST1-201ENST00000378043 CACHD1Q5VU97 1274 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ZNF551Q7Z340 670 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 GPR149Q86SP6 731 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 GALNT13Q8IUC8 556 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 CROCCP3Q8IVE0 287 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 MICU2Q8IYU8 434 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 C8orf59Q8N0T1 100 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 ARL14EPQ8N8R7 260 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 CHDHQ8NE62 594 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 NETO1Q8TDF5 533 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 THAP11Q96EK4 314 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 IGSF21Q96ID5 467 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ZNF334Q9HCZ1 680 aaPredicted RBP10.68□□□□□ -0.7
BEST1-201ENST00000378043 HPS4Q9NQG7 708 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 C1orf109Q9NX04 203 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 USE1Q9NZ43 259 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 TMEM9Q9P0T7 183 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 CRLS1Q9UJA2 301 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 CDH23Q9H251 3354 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 HOXA2O43364 376 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 ABCB7O75027 752 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 CREG1O75629 220 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 STK16O75716 305 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 SCELO95171 688 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 PDYNP01213 254 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 C1QCP02747 245 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 TACR1P25103 407 aa10.68□□□□□ -0.7
BEST1-201ENST00000378043 DCTP40126 519 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms