RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZSWIM7Q19AV6 140 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 HKDC1Q2TB90 917 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 HFE2Q6ZVN8 426 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF367Q7RTV3 350 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SERPINA9Q86WD7 417 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 RASAL3Q86YV0 1011 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 GJD3Q8N144 294 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SLC15A4Q8N697 577 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 OR10G2Q8NGC3 310 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PLD4Q96BZ4 506 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 EXOC2Q96KP1 924 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SPATA17Q96L03 361 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 MAPKAP1Q9BPZ7 522 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CPNE5Q9HCH3 593 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 AGPAT4Q9NRZ5 378 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 IGSF5Q9NSI5 407 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TAS2R7Q9NYW3 318 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 A0A1W2PQ67 120 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 AURKAO14965 403 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ACSL4O60488 711 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 URODP06132 367 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CBSLP0DN79 551 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CBSP35520 551 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 RPIAP49247 311 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CDH12P55289 794 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ARHGAP1Q07960 439 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 DNASE1L3Q13609 305 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SLC36A3Q495N2 470 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 DCST1Q5T197 706 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 DEF8Q6ZN54 512 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 KRT74Q7RTS7 529 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TRPV1Q8NER1 839 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TMIGD2Q96BF3 282 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CNDP2Q96KP4 475 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TRIB3Q96RU7 358 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ANKRA2Q9H9E1 313 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 MAGEB3O15480 346 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TFAP2AP05549 437 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 COL6A1P12109 1028 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 BEX3Q00994 111 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SREBF2Q12772 1141 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 STX4Q12846 297 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 LRP8Q14114 963 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 KLHL22Q53GT1 634 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 DCDC5Q6ZRR9 648 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ARNTL2Q8WYA1 636 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CDKN2AIPNLQ96HQ2 116 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ZDHHC6Q9H6R6 413 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 FBRSL1Q9HCM7 1045 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PAK6Q9NQU5 681 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TMEM248Q9NWD8 314 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PCDHB9Q9Y5E1 797 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 IGKV6-21A0A0C4DH24 114 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 TCRBV5S1A1TA0A578 114 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 FABP12A6NFH5 140 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 TCAF2A6NFQ2 919 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 PRAMEF1O95521 474 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 PGK1P00558 417 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 GGT1P19440 569 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 FDXRP22570 491 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 HNMTP50135 292 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 GJA9P57773 515 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 VBP1P61758 197 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SMU1Q2TAY7 513 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 LAPTM4BQ86VI4 370 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 OSTM1Q86WC4 334 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 GATAD2AQ86YP4 633 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
PCDH9-202ENST00000377865 GPR156Q8NFN8 814 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 OR13C4Q8NGS5 318 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 MND1Q9BWT6 205 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SPATA9Q9BWV2 254 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 TESMINQ9Y4I5 508 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ANKRD33BA6NCL7 494 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 OR51F1A6NGY5 319 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 USP2O75604 605 aaPredicted RBP8.6□□□□□ -1.03
PCDH9-202ENST00000377865 CLIC3O95833 236 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SYCE2Q6PIF2 218 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 MTSS1LQ765P7 747 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ZFAND4Q86XD8 727 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 TMEM169Q96HH4 297 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SLC30A2Q9BRI3 323 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 FUNDC2Q9BWH2 189 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 TRPV5Q9NQA5 729 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 CDC14AQ9UNH5 594 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ST14Q9Y5Y6 855 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 UBE2QL1A1L167 161 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 CARNS1A5YM72 827 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ARL5CA6NH57 179 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 TSPAN9O75954 239 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 GADD45GO95257 159 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 NR2F1P10589 423 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 G6PDP11413 515 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 EPHX2P34913 555 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 TAPT1Q6NXT6 567 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 USP50Q70EL3 339 aaPredicted RBP8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SNX20Q7Z614 316 aa8.6□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF467Q7Z7K2 595 aaPredicted RBP8.6□□□□□ -1.03
PCDH9-202ENST00000377865 SIX5Q8N196 739 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms