RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	EDF1	O60869	148 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	MT-ND1	P03886	318 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	DRD4	P21917	467 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	PRDX3	P30048	256 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	CCR7	P32248	378 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	PPP1R3A	Q16821	1122 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	FBXO43	Q4G163	708 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	SLC9B1	Q4ZJI4	515 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	PRPF38B	Q5VTL8	546 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	CYP20A1	Q6UW02	462 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	PTER	Q96BW5	349 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	TLCD1	Q96CP7	247 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	WDR92	Q96MX6	357 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	OR52B2	Q96RD2	323 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	STARD5	Q9NSY2	213 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	INTS10	Q9NVR2	710 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	EGFL7	Q9UHF1	273 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	CHD7	Q9P2D1	2997 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	POLE	Q07864	2286 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	ZNF682	O95780	498 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	ITGB7	P26010	798 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	CYP51A1	Q16850	503 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	MUM1	Q2TAK8	710 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	VPS26B	Q4G0F5	336 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	VRK3	Q8IV63	474 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	GALNT4	Q8N4A0	578 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	RERG	Q96A58	199 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	SLC39A3	Q9BRY0	314 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	MCMBP	Q9BTE3	642 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	CACNA1C	Q13936	2221 aa		13.23	□□□□□ -0.29
DDR1-225	ENST00000376568	OR6C74	A6NCV1	312 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	TMEM247	A6NEH6	219 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	C5orf58	C9J3I9	102 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	C8orf89	P0DMQ9	161 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	SIM2	Q14190	667 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	TEAD4	Q15561	434 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	CCSMST1	Q4G0I0	132 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	CLYBL	Q8N0X4	340 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	CDRT15	Q96T59	188 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	CEP44	Q9C0F1	390 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	TRIM39	Q9HCM9	518 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	EPS15L1	Q9UBC2	864 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	C5orf67	F2Z3F1	127 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	CDH1	P12830	882 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	COL9A1	P20849	921 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	RNF144A	P50876	292 aa	Predicted RBP	13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	IHH	Q14623	411 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	NAA25	Q14CX7	972 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	MLIP	Q5VWP3	458 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	PAOX	Q6QHF9	649 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	DSEL	Q8IZU8	1212 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	OR13H1	Q8NG92	308 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	LPGAT1	Q92604	370 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	PDXP	Q96GD0	296 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	OR2M4	Q96R27	311 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	SH3GL2	Q99962	352 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	ZNF180	Q9UJW8	692 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	RAP2C	Q9Y3L5	183 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	RNF103-CHMP3	A0A140T963	221 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	LBP	P18428	481 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	HNRNPA2B1	P22626	353 aa	Known RBP	13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	LTBR	P36941	435 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	HTR4	Q13639	388 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	KCTD11	Q693B1	232 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	GCNT7	Q6ZNI0	430 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	LPCAT2	Q7L5N7	544 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	LMNTD2	Q8IXW0	634 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	GPR135	Q8IZ08	494 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	OR4F6	Q8NGB9	312 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	ATL1	Q8WXF7	558 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	FIG4	Q92562	907 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	RCN3	Q96D15	328 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	APOO	Q9BUR5	198 aa		13.22	□□□□□ -0.29
DDR1-225	ENST00000376568	TMEM265	A0A087WTH1	108 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	CTBS	Q01459	385 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	CRIPAK	Q8N1N5	446 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	PELI3	Q8N2H9	469 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	CMTM5	Q96DZ9	223 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	QSOX1	O00391	747 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	MRAS	O14807	208 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	SRF	P11831	508 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	CDK3	Q00526	305 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	HMGN2P46	Q86SG4	172 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	RNF168	Q8IYW5	571 aa	Predicted RBP	13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	AADAT	Q8N5Z0	425 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	VPS37A	Q8NEZ2	397 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	YIPF4	Q9BSR8	244 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	ADAMTS6	Q9UKP5	1117 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	SNX6	Q9UNH7	406 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568		R4GN57	208 aa		13.21	□□□□□ -0.29
DDR1-225	ENST00000376568	FADS2P1	A8MWK0	482 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	SERPINI2	O75830	405 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	S100A3	P33764	101 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	DGKQ	P52824	942 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	RALGDS	Q12967	914 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	ZYG11A	Q6WRX3	759 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	SHISA6	Q6ZSJ9	500 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	PRPF18	Q99633	342 aa	Known RBP	13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	PSD3	Q9NYI0	1048 aa		13.21	□□□□□ -0.3
DDR1-225	ENST00000376568	AK5	Q9Y6K8	562 aa		13.21	□□□□□ -0.3

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