RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 LNPEPQ9UIQ6 1025 aa16.39■□□□□ 0.21
PHGDH-202ENST00000369409 CHURC1-FNTBB4DL54 471 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 KMOO15229 486 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 SEMA4FO95754 770 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 CHEK2O96017 543 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 CAPN1P07384 714 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 LINC00032P0C843 101 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 PIK3CGP48736 1102 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 CLDN2P57739 230 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 GAS6Q14393 721 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 EFL1Q7Z2Z2 1120 aaKnown RBP16.38■□□□□ 0.21
PHGDH-202ENST00000369409 SNX31Q8N9S9 440 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 OR52A5Q9H2C5 316 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 SGK2Q9HBY8 427 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 GIMAP2Q9UG22 337 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 CA5BQ9Y2D0 317 aa16.38■□□□□ 0.21
PHGDH-202ENST00000369409 MRPS17Q9Y2R5 130 aaKnown RBP16.38■□□□□ 0.21
PHGDH-202ENST00000369409 POM121BA6NF01 834 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 MYO1CO00159 1063 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 CACNB4O00305 520 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 HNRNPCL1O60812 293 aaKnown RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 C1orf105O95561 183 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 ITPKAP23677 461 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 RASSF2P50749 326 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 CCR3P51677 355 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 KLF10Q13118 480 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 LARP4Q71RC2 724 aaKnown RBP eCLIP16.37■□□□□ 0.212e-6■□□□□ 11.3
PHGDH-202ENST00000369409 CHST15Q7LFX5 561 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 MILR1Q7Z6M3 343 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 SYNPOQ8N3V7 929 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 POU5F2Q8N7G0 328 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 DENND6BQ8NEG7 585 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 SPDYE1Q8NFV5 336 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 CCDC138Q96M89 665 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 HHIPQ96QV1 700 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 STOX2Q9P2F5 926 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 POLG2Q9UHN1 485 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 MOSPD1Q9UJG1 213 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 CYP8B1Q9UNU6 501 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 ST14Q9Y5Y6 855 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 H0Y8X5 98 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 FUCA1P04066 466 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 CEACAM5P06731 702 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 ACP5P13686 325 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 EPORP19235 508 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 HMOX2P30519 316 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 HTR6P50406 440 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 KCNJ2P63252 427 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 CDC16Q13042 620 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 RPA4Q13156 261 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 TTC23LQ6PF05 361 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 SCIMPQ6UWF3 145 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 PDZD3Q86UT5 571 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 TSTD1Q8NFU3 115 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 METTL6Q8TCB7 284 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 PKP4Q99569 1192 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 AKTIPQ9H8T0 292 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 MRPL40Q9NQ50 206 aaKnown RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 PSMD13Q9UNM6 376 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 SLC17A4Q9Y2C5 497 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 COPG1Q9Y678 874 aaKnown RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 DNMT3AQ9Y6K1 912 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-202ENST00000369409 LRP4O75096 1905 aa16.37■□□□□ 0.21
PHGDH-202ENST00000369409 KANSL1LA0AUZ9 987 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 H0YHG0 523 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 UBDO15205 165 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 SLC16A8O95907 504 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 HGFP14210 728 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 HNRNPA2B1P22626 353 aaKnown RBP16.36■□□□□ 0.21
PHGDH-202ENST00000369409 ACADLP28330 430 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 IMPA1P29218 277 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 NAA25Q14CX7 972 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 HABP4Q5JVS0 413 aaKnown RBP16.36■□□□□ 0.21
PHGDH-202ENST00000369409 AGTRAPQ6RW13 159 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 RINLQ6ZS11 566 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 CHSY3Q70JA7 882 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 MYLK4Q86YV6 388 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-202ENST00000369409 GALNT13Q8IUC8 556 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 SIX5Q8N196 739 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 CPSF7Q8N684 471 aaKnown RBP16.36■□□□□ 0.21
PHGDH-202ENST00000369409 FBXO15Q8NCQ5 510 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-202ENST00000369409 ATL1Q8WXF7 558 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 TUBGCP3Q96CW5 907 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 NTMT1Q9BV86 223 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 ZDHHC5Q9C0B5 715 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 DNAJC11Q9NVH1 559 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 WNT16Q9UBV4 365 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 SLC22A14Q9Y267 594 aa16.36■□□□□ 0.21
PHGDH-202ENST00000369409 CFAP73A6NFT4 308 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 FAM170BA6NMN3 283 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 FPGTO14772 594 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 FFAR3O14843 346 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 GPR42O15529 346 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 LATO43561 262 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 IGLV3-19P01714 112 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 PIK3R1P27986 724 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 PTPN4P29074 926 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 STARD6P59095 220 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 PFN3P60673 137 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 FZD5Q13467 585 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms