RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 C6orf15Q6UXA7 325 aaPredicted RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 SDCCAG8Q86SQ7 713 aaPredicted RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 CILP2Q8IUL8 1156 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 ZNF669Q96BR6 464 aaPredicted RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 SLC45A3Q96JT2 553 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 CAPZA3Q96KX2 299 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 TRAPPC9Q96Q05 1148 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 OR2A14Q96R47 310 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 NAPGQ99747 312 aaPredicted RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 SPHK1Q9NYA1 384 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 SAMD15Q9P1V8 674 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 IL17BQ9UHF5 180 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 PLAGL1Q9UM63 463 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 TDRKHQ9Y2W6 561 aaKnown RBP18.35■□□□□ 0.53
CKS1B-203ENST00000368439 RPS6KL1Q9Y6S9 549 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 PIEZO2Q9H5I5 2752 aa18.35■□□□□ 0.53
CKS1B-203ENST00000368439 BSNQ9UPA5 3926 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 CFAP46Q8IYW2 2715 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 PIPSLA2A3N6 862 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 USP1O94782 785 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 S1PR4O95977 384 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 ITGB2P05107 769 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 CHRM5P08912 532 aaPredicted RBP18.34■□□□□ 0.53
CKS1B-203ENST00000368439 PVRP15151 417 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 PAMP19021 973 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 F8A1P23610 371 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 PEBP1P30086 187 aaKnown RBP18.34■□□□□ 0.53
CKS1B-203ENST00000368439 FMO4P31512 558 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 ARL4DP49703 201 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 ABRQ12979 859 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 GBX1Q14549 363 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 KYNUQ16719 465 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 TAF1BQ53T94 588 aaPredicted RBP18.34■□□□□ 0.53
CKS1B-203ENST00000368439 RNF187Q5TA31 235 aaPredicted RBP18.34■□□□□ 0.53
CKS1B-203ENST00000368439 SPESP1Q6UW49 350 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 UNC5DQ6UXZ4 953 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 OTUD6BQ8N6M0 293 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 ZSCAN1Q8NBB4 408 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 SEMA4CQ9C0C4 833 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 GPN2Q9H9Y4 310 aaPredicted RBP18.34■□□□□ 0.53
CKS1B-203ENST00000368439 OR6C2Q9NZP2 312 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 GALPQ9UBC7 116 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 SAR1BQ9Y6B6 198 aa18.34■□□□□ 0.53
CKS1B-203ENST00000368439 NIPSNAP2O75323 286 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 ESR1P03372 595 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 F7P08709 466 aaPredicted RBP18.33■□□□□ 0.52
CKS1B-203ENST00000368439 MSL3P1P0C860 447 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 UGT2B7P16662 529 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 PKLRP30613 574 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 LY6DQ14210 128 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 TMED2Q15363 201 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 PLEKHS1Q5SXH7 462 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 TMTC4Q5T4D3 741 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 LINC01555Q8NAE3 123 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 OR8K5Q8NH50 307 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 LATS2Q9NRM7 1088 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 KCND1Q9NSA2 647 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 SOHLH2Q9NX45 425 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 LNPEPQ9UIQ6 1025 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 CRYL1Q9Y2S2 319 aa18.33■□□□□ 0.52
CKS1B-203ENST00000368439 COL6A6A6NMZ7 2263 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 KPNA5O15131 536 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 NKX2-8O15522 239 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 ZIC1Q15915 447 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 TBR1Q16650 682 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 MSS51Q4VC12 460 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 OTOAQ7RTW8 1153 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 TRIM73Q86UV7 250 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 HOOK3Q86VS8 718 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 DCUN1D3Q8IWE4 304 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 DENND6AQ8IWF6 608 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 EXD3Q8N9H8 876 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 SLC38A9Q8NBW4 561 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 CFAP61Q8NHU2 1237 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 EXTL1Q92935 676 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 KIAA1143Q96AT1 154 aaPredicted RBP18.32■□□□□ 0.52
CKS1B-203ENST00000368439 STAMBPL1Q96FJ0 436 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 EFHD1Q9BUP0 239 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 KLHL25Q9H0H3 589 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 AKIRIN1Q9H9L7 192 aaPredicted RBP18.32■□□□□ 0.52
CKS1B-203ENST00000368439 INTS10Q9NVR2 710 aaKnown RBP18.32■□□□□ 0.52
CKS1B-203ENST00000368439 ASIC3Q9UHC3 531 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 CROTQ9UKG9 612 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 MED16Q9Y2X0 877 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 MRPS18BQ9Y676 258 aaKnown RBP18.32■□□□□ 0.52
CKS1B-203ENST00000368439 NFS1Q9Y697 457 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 FAM169AQ9Y6X4 670 aa18.32■□□□□ 0.52
CKS1B-203ENST00000368439 FER1L5A0AVI2 2057 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 CTAGE9A4FU28 777 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 ZNF891A8MT65 544 aaPredicted RBP18.31■□□□□ 0.52
CKS1B-203ENST00000368439 H3BMM5 538 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 MT-ND3P03897 115 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 NTRK1P04629 796 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 PKMP14618 531 aaKnown RBP18.31■□□□□ 0.52
CKS1B-203ENST00000368439 GABRA4P48169 554 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 RAB28P51157 221 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 CTBP1Q13363 440 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 LONRF1Q17RB8 773 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 PRAMEF17Q5VTA0 474 aa18.31■□□□□ 0.52
CKS1B-203ENST00000368439 IZUMO3Q5VZ72 239 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms