RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 FOXE3Q13461 319 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 MESDQ14696 234 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 ZRSR2Q15696 482 aaKnown RBP7.82□□□□□ -1.16
YBX3-204ENST00000366290 CCDC6Q16204 474 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 CERCAMQ5T4B2 595 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 C9orf64Q5T6V5 341 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 N4BP2L1Q5TBK1 243 aaPredicted RBP7.82□□□□□ -1.16
YBX3-204ENST00000366290 FAM72AQ5TYM5 149 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 LYSMD4Q5XG99 296 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 FAM72DQ6L9T8 149 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 RABEPKQ7Z6M1 372 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 KIAA1328Q86T90 577 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 FAM72BQ86X60 149 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 CCDC28AQ8IWP9 274 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 APCDD1Q8J025 514 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 PYROXD2Q8N2H3 581 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 LRRC57Q8N9N7 239 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 OR52K2Q8NGK3 314 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 CEP76Q8TAP6 659 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 ATG4AQ8WYN0 398 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 DNASE2BQ8WZ79 361 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 PRCCQ92733 491 aaPredicted RBP7.82□□□□□ -1.16
YBX3-204ENST00000366290 FAM131CQ96AQ9 280 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 RPRD1AQ96P16 312 aaPredicted RBP7.82□□□□□ -1.16
YBX3-204ENST00000366290 SNRNP25Q9BV90 132 aaKnown RBP7.82□□□□□ -1.16
YBX3-204ENST00000366290 PCDHAC1Q9H158 963 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 GPATCH2LQ9NWQ4 482 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 VANGL2Q9ULK5 521 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 FZD10Q9ULW2 581 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 ERVW-1Q9UQF0 538 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 HS3ST2Q9Y278 367 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 PPP2R2CQ9Y2T4 447 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 HYOU1Q9Y4L1 999 aa7.82□□□□□ -1.16
YBX3-204ENST00000366290 MACROD2A1Z1Q3 448 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 TMEM110-MUSTN1A8MSY1 372 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 E9PAM4 449 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 C1QTNF3-AMACRE9PGA6 284 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 PPM1DO15297 605 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 CSTBP04080 98 aaKnown RBP7.81□□□□□ -1.16
YBX3-204ENST00000366290 CCDC175P0C221 793 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 ITGAMP11215 1152 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 HALP42357 657 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 DHPSP49366 369 aaPredicted RBP7.81□□□□□ -1.16
YBX3-204ENST00000366290 ARSEP51690 589 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 AIF1P55008 147 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 ST8SIA6P61647 398 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 RPS14P62263 151 aaKnown RBP7.81□□□□□ -1.16
YBX3-204ENST00000366290 ZNF33AQ06730 810 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 GALNT1Q10472 559 aaPredicted RBP7.81□□□□□ -1.16
YBX3-204ENST00000366290 KIF5AQ12840 1032 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 ST3GAL2Q16842 350 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 PFKFB4Q16877 469 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 CCDC38Q502W7 563 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 ALFQ53S48 1182 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 INO80DQ53TQ3 878 aaPredicted RBP7.81□□□□□ -1.16
YBX3-204ENST00000366290 DEPDC1Q5TB30 811 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 FAXCQ5TGI0 409 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 C11orf63Q6NUN7 778 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 SCYL2Q6P3W7 929 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 MZT2AQ6P582 158 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 LRRC31Q6UY01 552 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 SPRED1Q7Z699 444 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 SLFN11Q7Z7L1 901 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 KRT73Q86Y46 540 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 LNX2Q8N448 690 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 HERPUD2Q9BSE4 406 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 ZBTB26Q9HCK0 441 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 OBP2BQ9NPH6 170 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 CD93Q9NPY3 652 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 TESQ9UGI8 421 aaKnown RBP7.81□□□□□ -1.16
YBX3-204ENST00000366290 PCSK1NQ9UHG2 260 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 SLCO3A1Q9UIG8 710 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 RALYQ9UKM9 306 aaKnown RBP7.81□□□□□ -1.16
YBX3-204ENST00000366290 MYRFQ9Y2G1 1151 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 ALG6Q9Y672 507 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 LAMA5O15230 3695 aa7.81□□□□□ -1.16
YBX3-204ENST00000366290 SHROOM3Q8TF72 1996 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 ADAMTS9Q9P2N4 1935 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 CACNA1GO43497 2377 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 ILVBLA1L0T0 632 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 AQP12BA6NM10 295 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 USP27XA6NNY8 438 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 TTC34A8MYJ7 566 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 CDX4O14627 284 aaPredicted RBP7.8□□□□□ -1.16
YBX3-204ENST00000366290 ALOX15BO15296 676 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 PRPSAP2O60256 369 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 RNF8O76064 485 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 CNTN5O94779 1100 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 PDHA1P08559 390 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 SERPINF2P08697 491 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 ACADMP11310 421 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 HGFP14210 728 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 TYRP1P17643 537 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 IL4RP24394 825 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 MARCKSL1P49006 195 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 IRX4P78413 519 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 SHC2P98077 582 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 CCNIQ14094 377 aa7.8□□□□□ -1.16
YBX3-204ENST00000366290 ELAVL3Q14576 367 aaKnown RBP7.8□□□□□ -1.16
YBX3-204ENST00000366290 DPYSL2Q16555 572 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms