RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CNIH3Q8TBE1 160 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 ARRDC2Q8TBH0 407 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 NUDT8Q8WV74 236 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 NODALQ96S42 347 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 ERVK-6Q9BXR3 956 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 TRIM15Q9C019 465 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 ARHGAP39Q9C0H5 1083 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 BPIFA1Q9NP55 256 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 RNF112Q9ULX5 631 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMG6-202ENST00000354901 BTBD3Q9Y2F9 522 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 LAMA3Q16787 3333 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 E5RI56 91 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 M0QZQ0 153 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 CDC7O00311 574 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 NUPL2O15504 423 aaKnown RBP9.2□□□□□ -0.94
SMG6-202ENST00000354901 GPR39O43194 453 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 CYP11A1P05108 521 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 ASGR1P07306 291 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 ATXN1LP0C7T5 689 aaKnown RBP9.2□□□□□ -0.94
SMG6-202ENST00000354901 PSKH1P11801 424 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 KCNQ1P51787 676 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 ATP6V0D1P61421 351 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 TRAF3Q13114 568 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 FAM45BPQ6NSW5 357 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 THAP5Q7Z6K1 395 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 NLGN4XQ8N0W4 816 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 FAM45AQ8TCE6 357 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 TRIB2Q92519 343 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 CEP19Q96LK0 163 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 YME1L1Q96TA2 773 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 NUAK2Q9H093 628 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 MFSD1Q9H3U5 465 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 ERVK13-1Q9NX77 482 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 MAP10Q9P2G4 905 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 NUFIP1Q9UHK0 495 aaKnown RBP9.2□□□□□ -0.94
SMG6-202ENST00000354901 VPS4AQ9UN37 437 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 EIF3LQ9Y262 564 aaKnown RBP9.2□□□□□ -0.94
SMG6-202ENST00000354901 TLR6Q9Y2C9 796 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 COMMD10Q9Y6G5 202 aa9.2□□□□□ -0.94
SMG6-202ENST00000354901 SAGE2PA6NJ88 616 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 B8ZZF3 427 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 NT5C1B-RDH14C9J2C7 533 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 RGS5O15539 181 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 TBC1D4O60343 1298 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 UGT2B11O75310 529 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 RASAL1O95294 804 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 GPX3P22352 226 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 S100A5P33763 92 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 EIF2DP41214 584 aaKnown RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 PPP5CP53041 499 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 UBE3AQ05086 875 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 TRIP4Q15650 581 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 CTXN3Q4LDR2 81 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 AGAP6Q5VW22 663 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 MRNIPQ6NTE8 343 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 KLHDC8BQ8IXV7 354 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 UMODL1-AS1Q8N2C9 162 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 MFSD2AQ8NA29 543 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 VPS37AQ8NEZ2 397 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 OR4K2Q8NGD2 314 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 SLC22A17Q8WUG5 538 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 MSANTD3Q96H12 275 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 TMEM74Q96NL1 305 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 AGAP4Q96P64 663 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 NEDD4LQ96PU5 975 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 CDK15Q96Q40 435 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 PSKH2Q96QS6 385 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 TUBB1Q9H4B7 451 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 CATSPERZQ9NTU4 200 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 POLR3BQ9NW08 1133 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 GALPQ9UBC7 116 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 HCSTQ9UBK5 93 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 IKZF3Q9UKT9 509 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 NDUFAF1Q9Y375 327 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 NPEPPSL1A6NEC2 478 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 OR6C70A6NIJ9 312 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 ARPC2O15144 300 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 POLR1CO15160 346 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 RECQL5O94762 991 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 CPNE6O95741 557 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 CYBBP04839 570 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 COL6A1P12109 1028 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 ZNF37AP17032 561 aaPredicted RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 MSH3P20585 1137 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 PRKACGP22612 351 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 GP2P55259 537 aaKnown RBP9.19□□□□□ -0.94
SMG6-202ENST00000354901 DEFA1P59665 94 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 DEFA3P59666 94 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 ATP6AP1Q15904 470 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 CTF1Q16619 201 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 UGT3A2Q3SY77 523 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 Q5BKY6 102 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 AFMIDQ63HM1 303 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 GTF2IRD2BQ6EKJ0 949 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 GLB1LQ6UWU2 654 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 PLEKHM3Q6ZWE6 761 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 GDPD3Q7L5L3 318 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 GALNT5Q7Z7M9 940 aa9.19□□□□□ -0.94
SMG6-202ENST00000354901 GTF2IRD2Q86UP8 949 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms