RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MAPK10P53779 464 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ADARB1P78563 741 aaKnown RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ANKRD26P1Q6NSI1 321 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 GLT6D1Q7Z4J2 308 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 RAB44Q7Z6P3 723 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ZBTB46Q86UZ6 589 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 RHEBL1Q8TAI7 183 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 PIF1Q9H611 641 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 TRPV4Q9HBA0 871 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 C8orf4Q9NR00 106 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 TBC1D23Q9NUY8 699 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 INTS10Q9NVR2 710 aaKnown RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 CLDND1Q9NY35 253 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF639Q9UID6 485 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 IKZF3Q9UKT9 509 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 NUMA1Q14980 2115 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 H0Y858 1186 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 HOXC11O43248 304 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 CLDN7O95471 211 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 PRR35P0CG20 571 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 HRH2P25021 359 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ELK4P28324 431 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 HNF1BP35680 557 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 OPRD1P41143 372 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 CASP2P42575 452 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 DGKGP49619 791 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 HLCSP50747 726 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 SUOXP51687 545 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 KCNK10P57789 538 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 UFM1P61960 85 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 LCP2Q13094 533 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 TGFBIQ15582 683 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 OTUD3Q5T2D3 398 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 OGFOD2Q6N063 350 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 NANOGP8Q6NSW7 305 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 PSAPL1Q6NUJ1 521 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 TBC1D21Q8IYX1 336 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 BORCS5Q969J3 196 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 VPS50Q96JG6 964 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 MSLNLQ96KJ4 702 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 MUS81Q96NY9 551 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 CHID1Q9BWS9 393 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 CIPCQ9C0C6 399 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 INTS7Q9NVH2 962 aaKnown RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 NLE1Q9NVX2 485 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 GDE1Q9NZC3 331 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 IFT80Q9P2H3 777 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 FKBPLQ9UIM3 349 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ANAPC2Q9UJX6 822 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF225Q9UK10 706 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 SH3GLB1Q9Y371 365 aa8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ARIH1Q9Y4X5 557 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF106Q9H2Y7 1883 aaKnown RBP8.43□□□□□ -1.06
TRIM55-204ENST00000353317 NPIPB15A6NHN6 443 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SOX1O00570 391 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SUPT3HO75486 399 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 CPNE6O95741 557 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 LDLRP01130 860 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 UGT2B4P06133 528 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 LAMP2P13473 410 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 HLA-EP13747 358 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 PSMA3P25788 255 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SOX9P48436 509 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 CSNK1DP48730 415 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 CD97P48960 835 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 BMXP51813 675 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 AP1S1P61966 158 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 FCHO2Q0JRZ9 810 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 TAF1AQ15573 450 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ZIK1Q3SY52 487 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 POM121L1PQ3SYA9 428 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SPATS1Q496A3 300 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 CCNYL2Q5T2Q4 361 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 TMEM214Q6NUQ4 689 aaKnown RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SCIMPQ6UWF3 145 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ZC3H7AQ8IWR0 971 aaKnown RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 OR13F1Q8NGS4 319 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 BIRC7Q96CA5 298 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ECHDC3Q96DC8 303 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 PLEKHA8Q96JA3 519 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 RNF145Q96MT1 663 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 TFB2MQ9H5Q4 396 aaKnown RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ZDHHC6Q9H6R6 413 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 NANOGQ9H9S0 305 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 NTN4Q9HB63 628 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 AIG1Q9NVV5 245 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 PKD2L2Q9NZM6 624 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 IL17CQ9P0M4 197 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 GALPQ9UBC7 116 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 FAM50BQ9Y247 325 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 MED16Q9Y2X0 877 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 MUC3AQ02505 3323 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ZFC3H1O60293 1989 aaKnown RBP8.42□□□□□ -1.06
TRIM55-204ENST00000353317 KANSL1LA0AUZ9 987 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 CCDC154A6NI56 674 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SUPT3HB4E1H0 165 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 ARNTLO00327 626 aa8.42□□□□□ -1.06
TRIM55-204ENST00000353317 SLC9A3R1O14745 358 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms