RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 C21orf140B9A014 251 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 PRMT5O14744 637 aaPredicted RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 CD3EAPO15446 510 aaKnown RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 GPC4O75487 556 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 CREG1O75629 220 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 CHRM5P08912 532 aaPredicted RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 MSL3P1P0C860 447 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 PEBP1P30086 187 aaKnown RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 SHMT2P34897 504 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 PLOD1Q02809 727 aaPredicted RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 HSPA14Q0VDF9 509 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 ZIC1Q15915 447 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 ANKRD22Q5VYY1 191 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 LCN10Q6JVE6 187 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 CES3Q6UWW8 571 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 ZNF517Q6ZMY9 492 aaPredicted RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 CDHR3Q6ZTQ4 885 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 RASGEF1CQ8N431 466 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 C19orf47Q8N9M1 422 aaKnown RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 APOBEC4Q8WW27 367 aaKnown RBP12.86□□□□□ -0.35
CLCC1-202ENST00000348264 MFSD3Q96ES6 412 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 MS4A14Q96JA4 679 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 OR2A14Q96R47 310 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 KIFC1Q9BW19 673 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 CARD6Q9BX69 1037 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 TWSG1Q9GZX9 223 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 P2RY12Q9H244 342 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 HOMER3Q9NSC5 361 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 POLG2Q9UHN1 485 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 TUBD1Q9UJT1 453 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 ANAPC5Q9UJX4 755 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 PCDHB3Q9Y5E6 796 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
CLCC1-202ENST00000348264 TNRC6AQ8NDV7 1962 aaKnown RBP12.85□□□□□ -0.35
CLCC1-202ENST00000348264 F8W8V4 182 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 HCRTR1O43613 425 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 TMEM63AO94886 807 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 AOAHP28039 575 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 PKLRP30613 574 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 RORAP35398 523 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 PPARGP37231 505 aaPredicted RBP12.85□□□□□ -0.35
CLCC1-202ENST00000348264 MAGEA6P43360 314 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 NPY2RP49146 381 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 TTPAP49638 278 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 CDK16Q00536 496 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 GPS1Q13098 491 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 IL10RAQ13651 578 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 DEFB110Q30KQ9 67 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 DNAJC21Q5F1R6 531 aaKnown RBP12.85□□□□□ -0.35
CLCC1-202ENST00000348264 PLEKHS1Q5SXH7 462 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 MPP5Q8N3R9 675 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 LMNTD1Q8N9Z9 388 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 C9orf43Q8TAL5 461 aaPredicted RBP12.85□□□□□ -0.35
CLCC1-202ENST00000348264 CPT1BQ92523 772 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 MR1Q95460 341 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 TRIM56Q9BRZ2 755 aaKnown RBP12.85□□□□□ -0.35
CLCC1-202ENST00000348264 MENTQ9BUN1 341 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 TSSK1BQ9BXA7 367 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 TRIM4Q9C037 500 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 CHST8Q9H2A9 424 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 MRM3Q9HC36 420 aaKnown RBP12.85□□□□□ -0.35
CLCC1-202ENST00000348264 FAM60AQ9NP50 221 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 OR6C2Q9NZP2 312 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 CIDEBQ9UHD4 219 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 SOX13Q9UN79 622 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 POLHQ9Y253 713 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 JRKLQ9Y4A0 524 aa12.85□□□□□ -0.35
CLCC1-202ENST00000348264 RP1L1Q8IWN7 2480 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 A0A0J9YY10 115 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 GOLGA8TH3BQL2 631 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 AP3B1O00203 1094 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 SUV39H1O43463 412 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 AVILO75366 819 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 VAPBO95292 243 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 KRT14P02533 472 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 APOA4P06727 396 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 CYP2A7P20853 494 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 RPS3P23396 243 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 PTPN4P29074 926 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 GABRA4P48169 554 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 GRB7Q14451 532 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 TMED2Q15363 201 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 CTSL3PQ5NE16 218 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 PTRHD1Q6GMV3 140 aaKnown RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 FAM198BQ6UWH4 519 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 PTRH1Q86Y79 214 aaKnown RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 REXO1L1PQ8IX06 675 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 DSELQ8IZU8 1212 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 OTUD6BQ8N6M0 293 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 LINC01555Q8NAE3 123 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 CFAP61Q8NHU2 1237 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 ASZ1Q8WWH4 475 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 MAGOHBQ96A72 148 aaKnown RBP12.84□□□□□ -0.35
CLCC1-202ENST00000348264 ABHD17AQ96GS6 310 aa12.84□□□□□ -0.35
CLCC1-202ENST00000348264 LRFN5Q96NI6 719 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms