RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 INAVAQ3KP66 663 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 TSTD2Q5T7W7 516 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 OR2T5Q6IEZ7 315 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CYP4Z1Q86W10 505 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 DCP2Q8IU60 420 aaKnown RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 ATP6V0D2Q8N8Y2 350 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 OR2T29Q8NH02 315 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 SYT17Q9BSW7 474 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 MLPHQ9BV36 600 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 RACGAP1Q9H0H5 632 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 NECTIN3Q9NQS3 549 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 RCOR3Q9P2K3 495 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 PPP2R3BQ9Y5P8 575 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 KLRG2A4D1S0 409 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 MAZP56270 477 aaKnown RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 RPA4Q13156 261 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 PTPRCAPQ14761 206 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 FAM83FQ8NEG4 500 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 OR13F1Q8NGS4 319 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 IPCEF1Q8WWN9 437 aaPredicted RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 DEDD2Q8WXF8 326 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 NELL1Q92832 810 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 RANBP9Q96S59 729 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 GINS4Q9BRT9 223 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 ANKRA2Q9H9E1 313 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 TMEM138Q9NPI0 162 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 MIEF1Q9NQG6 463 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 PIGVQ9NUD9 493 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 C1orf109Q9NX04 203 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 PFDN2Q9UHV9 154 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 AP3M1Q9Y2T2 418 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 PER2O15055 1255 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 PRAMEF1O95521 474 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CD1EP15812 388 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 ITGALP20701 1170 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 KIR3DL1P43629 444 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF81P51508 661 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 OAZ1P54368 228 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 IRF8Q02556 426 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 SPANXN4Q5MJ08 99 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 AGAP6Q5VW22 663 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CES4AQ5XG92 561 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 LCN8Q6JVE9 175 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 SGCDQ92629 289 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 AGAP4Q96P64 663 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 RBM38Q9H0Z9 239 aaKnown RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 AGO3Q9H9G7 860 aaKnown RBP13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
COL2A1-201ENST00000337299 HMX2A2RU54 273 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 CREG1O75629 220 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 PTTG1O95997 202 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 GOT2P00505 430 aaKnown RBP13□□□□□ -0.33
COL2A1-201ENST00000337299 ATF6P18850 670 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 PAICSP22234 425 aaKnown RBP13□□□□□ -0.33
COL2A1-201ENST00000337299 CRHBPP24387 322 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 GPR15P49685 360 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 EMX1Q04741 257 aaPredicted RBP13□□□□□ -0.33
COL2A1-201ENST00000337299 OXA1LQ15070 435 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 RFPL4BQ6ZWI9 263 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 OR6Q1Q8NGQ2 317 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 FAM110BQ8TC76 370 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 SENP8Q96LD8 212 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 EBPLQ9BY08 206 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 ENOPH1Q9UHY7 261 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 CDC7O00311 574 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 CDK14O94921 469 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 STSP08842 583 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 SDC2P34741 201 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 ARHGEF6Q15052 776 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 BCL7AQ4VC05 210 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 STEAP3Q658P3 488 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 VANGL1Q8TAA9 524 aaPredicted RBP13□□□□□ -0.33
COL2A1-201ENST00000337299 ZFP3Q96NJ6 502 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 ASPNQ9BXN1 380 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 GSDMCQ9BYG8 508 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 PPIL3Q9H2H8 161 aaKnown RBP13□□□□□ -0.33
COL2A1-201ENST00000337299 KLHL31Q9H511 634 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 TMEM181Q9P2C4 612 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 VPS28Q9UK41 221 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 KCTD3Q9Y597 815 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 YJEFN3A6XGL0 299 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 KIAA0513O60268 411 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF7P17097 686 aaPredicted RBP13□□□□□ -0.33
COL2A1-201ENST00000337299 TBX4P57082 545 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 E2F2Q14209 437 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 SMN1Q16637 294 aaKnown RBP13□□□□□ -0.33
COL2A1-201ENST00000337299 CYBRD1Q53TN4 286 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 GARNL3Q5VVW2 1013 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 DEF8Q6ZN54 512 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 OR6C4Q8NGE1 309 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 MLXQ9UH92 298 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 DNAJC15Q9Y5T4 150 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 KDM3BQ7LBC6 1761 aa13□□□□□ -0.33
COL2A1-201ENST00000337299 RGPD1P0DJD0 1748 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms