RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CLDN11O75508 207 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 SLC25A14O95258 325 aaPredicted RBP13.19□□□□□ -0.3
CTDP1-202ENST00000299543 NAT2P11245 290 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 RING1Q06587 406 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 SPCS2Q15005 226 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 FAM98BQ52LJ0 330 aaKnown RBP13.19□□□□□ -0.3
CTDP1-202ENST00000299543 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 SPESP1Q6UW49 350 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 RNF180Q86T96 592 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
CTDP1-202ENST00000299543 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 PACRGLQ8N7B6 248 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 LILRB4Q8NHJ6 448 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 CDC26Q8NHZ8 85 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 SUN5Q8TC36 379 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 ZFP90Q8TF47 636 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.36e-6■■■■□ 21.9
CTDP1-202ENST00000299543 FANCEQ9HB96 536 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 ABCB10Q9NRK6 738 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 ADGRE2Q9UHX3 823 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
CTDP1-202ENST00000299543 C2orf78A6NCI8 922 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 DEAF1O75398 565 aaPredicted RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 MAPKAPK3Q16644 382 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ATAD3BQ5T9A4 648 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ENPP6Q6UWR7 440 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 SERPINA9Q86WD7 417 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ZCCHC7Q8N3Z6 543 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 PEX13Q92968 403 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 NUSAP1Q9BXS6 441 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 DPY30Q9C005 99 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ABT1Q9ULW3 272 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 TCRBV5S2A0A599 114 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 VNN2O95498 520 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 PRAMEF1O95521 474 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 CST1P01037 141 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 IGLV3-27P01718 113 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ANXA6P08133 673 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 TCF3P15923 654 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 TRPC1P48995 793 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 EEFSECP57772 596 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 EMX2Q04743 252 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 FOXD4Q12950 439 aaPredicted RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 PAGE2BQ5JRK9 111 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 RSBN1Q5VWQ0 802 aaPredicted RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ZFAND4Q86XD8 727 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ZDHHC13Q8IUH4 622 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 OR2T12Q8NG77 320 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 SCHIP1Q9P0W5 487 aaPredicted RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 PCDHGA11Q9Y5H2 935 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 TYW5A2RUC4 315 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 FAM155AB1AL88 458 aaPredicted RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 LRATO95237 230 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 CXCR2P25025 360 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ZFP36L2P47974 494 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 AQP6Q13520 282 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 XKR7Q5GH72 579 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 SPOUT1Q5T280 376 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 SLC22A16Q86VW1 577 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ABHD11Q8NFV4 315 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 TRUB1Q8WWH5 349 aaKnown RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 FATE1Q969F0 183 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 TTPALQ9BTX7 342 aa13.18□□□□□ -0.3
CTDP1-202ENST00000299543 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
CTDP1-202ENST00000299543 A8MV72 311 aaPredicted RBP13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ARVCFO00192 962 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 RAD51BO15315 384 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 STC2O76061 302 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ARSFP54793 590 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ARF5P84085 180 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 FOXM1Q08050 763 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
CTDP1-202ENST00000299543 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 GATAD2AQ86YP4 633 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 MMAAQ8IVH4 418 aaKnown RBP13.17□□□□□ -0.3
CTDP1-202ENST00000299543 SLC22A15Q8IZD6 547 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 LKAAEAR1Q8TD35 194 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 COMMD8Q9NX08 183 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ZIM2Q9NZV7 527 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 CRLS1Q9UJA2 301 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 UGT2A1Q9Y4X1 527 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 GREB1Q4ZG55 1949 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 HS6ST1O60243 411 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 SH3BGRLO75368 114 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 MBL2P11226 248 aaPredicted RBP13.17□□□□□ -0.3
CTDP1-202ENST00000299543 DDX5P17844 614 aaKnown RBP13.17□□□□□ -0.3
CTDP1-202ENST00000299543 SHMT2P34897 504 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 CA5AP35218 305 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 PTGER3P43115 390 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 CDH18Q13634 790 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ARMC12Q5T9G4 340 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms