RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 DENND6BQ8NEG7 585 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 SEC14L1Q92503 715 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 FERD3LQ96RJ6 166 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 C1orf109Q9NX04 203 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 SALL4Q9UJQ4 1053 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 CLDN5O00501 218 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 FBP2O00757 339 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 RGL2O15211 777 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 MTHFD1P11586 935 aaKnown RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 GBA2Q9HCG7 927 aaPredicted RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 CPSF4LA6NMK7 179 aaKnown RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 CLDN11O75508 207 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 BCAS2O75934 225 aaPredicted RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 ZMYND11Q15326 602 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 HAGHLQ6PII5 290 aaPredicted RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 FSTL5Q8N475 847 aaPredicted RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 JOSD2Q8TAC2 188 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 TRIM36Q9NQ86 728 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 MRPL17Q9NRX2 175 aaKnown RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 COL1A2P08123 1366 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 AMD1P17707 334 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 SLC1A2P43004 574 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 ZNF460Q14592 562 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 CYP2U1Q7Z449 544 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 PHYKPLQ8IUZ5 450 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 HDDC3Q8N4P3 179 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 KCNC2Q96PR1 638 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 SPIN1Q9Y657 262 aaPredicted RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 C9JVG2 144 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 GLUD2P49448 558 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 GNG2P59768 71 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 UBAP2Q5T6F2 1119 aaKnown RBP13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 OR2T5Q6IEZ7 315 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 OR2T29Q8NH02 315 aa13.4□□□□□ -0.26
NOTCH1-201ENST00000277541 VSTM1Q6UX27 236 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 FNDC8Q8TC99 324 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ACTR3BQ9P1U1 418 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ADRA1BP35368 520 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 CRY2Q49AN0 593 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 NBPF12Q5TAG4 269 aaPredicted RBP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 MFSD3Q96ES6 412 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 TMEM168Q9H0V1 697 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 SPATA31C2B4DYI2 1134 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 SCN2BO60939 215 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ASGR1P07306 291 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 TACSTD2P09758 323 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 KCNA5P22460 613 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 RPA4Q13156 261 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 USP41Q3LFD5 358 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 FAM46CQ5VWP2 391 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 TMEM209Q96SK2 561 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ZIM2Q9NZV7 527 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 RNF6Q9Y252 685 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 H3BM21 787 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 EPCAMP16422 314 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ARHGEF4Q9NR80 690 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 GNAZP19086 355 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 CLCN2P51788 898 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 POM121L1PQ3SYA9 428 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 INTS6LQ5JSJ4 861 aaKnown RBP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 TMBIM1Q969X1 311 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ZSWIM3Q96MP5 696 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 CAMK1GQ96NX5 476 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 C14orf105Q9NVL8 296 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 INMTO95050 263 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 MYCLP1P12525 358 aaPredicted RBP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 SCNN1GP51170 649 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ASCC1Q8N9N2 400 aaKnown RBP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 STOML3Q8TAV4 291 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 EXOSC8Q96B26 276 aaKnown RBP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ADAM2Q99965 735 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 HSPB11Q9Y547 144 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 GABBR2O75899 941 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 GRSF1Q12849 480 aaKnown RBP eCLIP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 PLEKHO2Q8TD55 490 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 IFT27Q9BW83 186 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 ADAMTS10Q9H324 1103 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 DDX4Q9NQI0 724 aaKnown RBP13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 PCDHGB6Q9Y5F9 930 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 DCLK1O15075 740 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 LYPLA2O95372 231 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 GSTT2P0CG29 244 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 PET100P0DJ07 73 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 GRK5P34947 590 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 HSPA7P48741 367 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 IRF9Q00978 393 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 RASGEF1BQ0VAM2 473 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 HSPB3Q12988 150 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 CACUL1Q86Y37 369 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 KLHL6Q8WZ60 621 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 GAL3ST3Q96A11 431 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 PCBD2Q9H0N5 130 aa13.39□□□□□ -0.27
NOTCH1-201ENST00000277541 MMP27Q9H306 513 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms