RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 B4GALT6Q9UBX8 382 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 FBXO10Q9UK96 956 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.05□□□□□ -0.16
TMEM47-201ENST00000275954 ZNF510Q9Y2H8 683 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 CFAP20Q9Y6A4 193 aaKnown RBP14.05□□□□□ -0.16
TMEM47-201ENST00000275954 SLC31A1O15431 190 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 SUV39H1O43463 412 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 DLGAP3O95886 979 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 SERPINA1P01009 418 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 HTR6P50406 440 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 PLEKHG6Q3KR16 790 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 LY6G5CQ5SRR4 150 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 OR4F3Q6IEY1 312 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 TYW3Q6IPR3 259 aaKnown RBP14.05□□□□□ -0.16
TMEM47-201ENST00000275954 CAPN13Q6MZZ7 669 aaPredicted RBP14.05□□□□□ -0.16
TMEM47-201ENST00000275954 KCNJ9Q92806 393 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 OR2AG1Q9H205 316 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 ATAD3AQ9NVI7 634 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 GPSM3Q9Y4H4 160 aa14.05□□□□□ -0.16
TMEM47-201ENST00000275954 SGTAO43765 313 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 B4GALT3O60512 393 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SERPINI2O75830 405 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SLC6A2P23975 617 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SCN1AP35498 2009 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 MERTKQ12866 999 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TLR1Q15399 786 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 ZNF648Q5T619 568 aaPredicted RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 ANKLE1Q8NAG6 615 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 OR4A15Q8NGL6 344 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 OR13J1Q8NGT2 312 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 OSBPL6Q9BZF3 934 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TNS1Q9HBL0 1735 aaKnown RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 VPS4AQ9UN37 437 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 LDB2O43679 373 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 LINGO3P0C6S8 592 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 ALDH4A1P30038 563 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SLC6A4P31645 630 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 PREPP48147 710 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SPIBQ01892 262 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 PRKCQQ04759 706 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 INO80DQ53TQ3 878 aaPredicted RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 DPY19L3Q6ZPD9 716 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 ZNF605Q86T29 641 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SLC15A3Q8IY34 581 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 AADATQ8N5Z0 425 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 OR7A2PQ8NGA2 310 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 FBXL20Q96IG2 436 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SUCOQ9UBS9 1254 aaKnown RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 OGDHLQ9ULD0 1010 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 DMTF1Q9Y222 760 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3DA0A087WVF3 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3IA0A087WXS9 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3EA0A087X179 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3KA0A087X1G2 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3FA6NER0 549 aaPredicted RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 FAM220BPB1ANY3 271 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3LB9A6J9 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3HP0C7X1 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 HNF1BP35680 557 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 SLC44A4Q53GD3 710 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 CARD16Q5EG05 197 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 OTUD1Q5VV17 481 aaPredicted RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3GQ6DHY5 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3CQ6IPX1 549 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TSPAN33Q86UF1 283 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 TBC1D3Q8IZP1 549 aaPredicted RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 ARL10Q8N8L6 244 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 PHF10Q8WUB8 498 aaKnown RBP14.04□□□□□ -0.16
TMEM47-201ENST00000275954 OR8D1Q8WZ84 308 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 LINC00597Q9H2U6 94 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 IKZF3Q9UKT9 509 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 PRKAB1Q9Y478 270 aa14.04□□□□□ -0.16
TMEM47-201ENST00000275954 ITGB8P26012 769 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 SERPINB1P30740 379 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 KCTD11Q693B1 232 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 CHSY3Q70JA7 882 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 DCAF4L2Q8NA75 395 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 TRPV3Q8NET8 790 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 SHKBP1Q8TBC3 707 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 PPP1R16AQ96I34 528 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 VPS35Q96QK1 796 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 SEC16AO15027 2179 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.03□□□□□ -0.16
TMEM47-201ENST00000275954 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.03□□□□□ -0.16
TMEM47-201ENST00000275954 AQP12BA6NM10 295 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 MUSKO15146 869 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 SMAD6O43541 496 aaKnown RBP14.03□□□□□ -0.16
TMEM47-201ENST00000275954 TGFB1P01137 390 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 SLC35G4P0C7Q5 338 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 SLC26A3P40879 764 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 MAPK9P45984 424 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 PSMD8P48556 350 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 DGKEP52429 567 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 MYLK3Q32MK0 819 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 NANOGP8Q6NSW7 305 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 AQP12AQ8IXF9 295 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 ZNF557Q8N988 423 aaPredicted RBP14.03□□□□□ -0.16
TMEM47-201ENST00000275954 C3orf30Q96M34 536 aa14.03□□□□□ -0.16
TMEM47-201ENST00000275954 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms