RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 AP2A2O94973 939 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 PKMP14618 531 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 NTSP30990 170 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 EDEM1Q92611 657 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 DEFB129Q9H1M3 183 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 NRCAMQ92823 1304 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 PRKYO43930 277 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 HCN1O60741 890 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 LEPRP48357 1165 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 PUDPQ08623 228 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 ADNP2Q6IQ32 1131 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 IGDCC3Q8IVU1 814 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 M0R233 179 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC28A2O43868 658 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 TFPTP0C1Z6 253 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 TYMPP19971 482 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 ALDH7A1P49419 539 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 PLD1Q13393 1074 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 STRA6Q9BX79 667 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 APOBEC3GQ9HC16 384 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 TCRBV7S3A2A0A539 114 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 FAM86C2PA6NEL3 165 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 PLOD2O00469 737 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 SDHDO14521 159 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 SNAP29O95721 258 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 SERPINA3P01011 423 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 CACNG1Q06432 222 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 RCAN2Q14206 197 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 GRIK4Q16099 956 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 RALGPS2Q86X27 583 aaPredicted RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 THRSPQ92748 146 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 OXCT2Q9BYC2 517 aaPredicted RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 KANSL3Q9P2N6 904 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 CPNE3O75131 537 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 RHOQP17081 205 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 CDHR3Q6ZTQ4 885 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 TRIM48Q8IWZ4 208 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 CARNMT1Q8N4J0 409 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF384Q8TF68 577 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 UROC1Q96N76 676 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF638Q14966 1978 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC9A3R1O14745 358 aaPredicted RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 TGM6O95932 706 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 PPP3R1P63098 170 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 GAD2Q05329 585 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 GALNT2Q10471 571 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 GTF2H2Q13888 395 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF697Q5TEC3 545 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 GTF2H2CQ6P1K8 395 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 USP45Q70EL2 814 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF467Q7Z7K2 595 aaPredicted RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 SMG7Q92540 1137 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■■■ 47.3
DNMT3A-201ENST00000264709 PTGFRNQ9P2B2 879 aa11.48□□□□□ -0.57
DNMT3A-201ENST00000264709 KIF26BQ2KJY2 2108 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 GRIN3BO60391 1043 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 TRAM1Q15629 374 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 MEDAGQ5VYS4 303 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 TAPT1Q6NXT6 567 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 CILP2Q8IUL8 1156 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 POLR3BQ9NW08 1133 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 ABI2Q9NYB9 513 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 NMBRP28336 390 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 RPS5P46782 204 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 HNMTP50135 292 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 SLC35G1Q2M3R5 365 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 IFI44LQ53G44 452 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 MIB1Q86YT6 1006 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 KLHL6Q8WZ60 621 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 TMEM181Q9P2C4 612 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 UBQLN2Q9UHD9 624 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 KEAP1Q14145 624 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 SNAPC1Q16533 368 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 KANK2Q63ZY3 851 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 GALNT5Q7Z7M9 940 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 IZUMO1Q8IYV9 350 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 OXR1Q8N573 874 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF668Q96K58 619 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 MTHFD1P11586 935 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 FEN1P39748 380 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 IRF9Q00978 393 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 CLCA4Q14CN2 919 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 AKAP1Q92667 903 aaKnown RBP eCLIP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 PRMT6Q96LA8 375 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 OSBPL2Q9H1P3 480 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 ZSCAN5BA6NJL1 495 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 WWP2O00308 870 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 PPP1R16AQ96I34 528 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 ZNF599Q96NL3 588 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 PAQR5Q9NXK6 330 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 OGDHLQ9ULD0 1010 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 KCNAB2Q13303 367 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 MON1AQ86VX9 555 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 SH3YL1Q96HL8 342 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 FAIM2Q9BWQ8 316 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 FAM120CQ9NX05 1096 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 UGT2A1Q9Y4X1 527 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 C17orf102A2RUQ5 167 aa11.47□□□□□ -0.57
DNMT3A-201ENST00000264709 PRG2P13727 222 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms