RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 YIPF1Q9Y548 306 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 PCDHGA11Q9Y5H2 935 aa12.35□□□□□ -0.43
RAB3IP-201ENST00000247833 BPTFQ12830 3046 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 A0A1W2PQ45 241 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 A0A1W2PQY0 241 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 TCRBV5S2A0A599 114 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CLDN9O95484 217 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CR2P20023 1033 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 XPAP23025 273 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 SERPINA4P29622 427 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 HNF1BP35680 557 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 RPS14P62263 151 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 TRAF3Q13114 568 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 MTA1Q13330 715 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 MYBPC3Q14896 1274 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 DLEU7Q6UYE1 221 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 SNX20Q7Z614 316 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 DNAJB7Q7Z6W7 309 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CD99L2Q8TCZ2 262 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 BCL7CQ8WUZ0 217 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 ATP13A3Q9H7F0 1226 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 RMND5AQ9H871 391 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 DNAJB9Q9UBS3 223 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 RIMKLBQ9ULI2 386 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 VNN2O95498 520 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 IGSF6O95976 241 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 OCM2P0CE71 109 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 OCMP0CE72 109 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 FMO3P31513 532 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CLCN4P51793 760 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 GRIK2Q13002 908 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 OR4F3Q6IEY1 312 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CXorf57Q6NSI4 855 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CRTC3Q6UUV7 619 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 SYT12Q8IV01 421 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CASD1Q96PB1 797 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 PANX1Q96RD7 426 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 MRPL9Q9BYD2 267 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CD244Q9BZW8 370 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 DNAAF2Q9NVR5 837 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 TUBA8Q9NY65 449 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 DYTNA2CJ06 578 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 MANBAO00462 879 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 PGLSO95336 258 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 BCKDHAP12694 445 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 GGT1P19440 569 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 GABRR2P28476 465 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 FAM189BP81408 668 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 MICU2Q8IYU8 434 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 CNIH3Q8TBE1 160 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 MTERF1Q99551 399 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 ASPSCR1Q9BZE9 553 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 SMG9Q9H0W8 520 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 PCDHGA8Q9Y5G5 932 aa12.34□□□□□ -0.43
RAB3IP-201ENST00000247833 FAM92AA1XBS5 289 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 FAM155AB1AL88 458 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 H3BNC9 293 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 IFRD1O00458 451 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 SH3BP5O60239 455 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 MITFO75030 526 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 CREG1O75629 220 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 MATN1P21941 496 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 SPAM1P38567 509 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 HLCSP50747 726 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 EPHB3P54753 998 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 BTG3Q14201 252 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 ANKRD26P1Q6NSI1 321 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 RFLNAQ6ZTI6 216 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 PTRH1Q86Y79 214 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 ARL10Q8N8L6 244 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 LEMD2Q8NC56 503 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 EID2BQ96D98 161 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 EGLN2Q96KS0 407 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 INPP5KQ9BT40 448 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 RAD21L1Q9H4I0 556 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 CFAP97Q9P2B7 532 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 OR2AG2A6NM03 316 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 BPIP17213 487 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 RECQLP46063 649 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 IRF8Q02556 426 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 SMARCB1Q12824 385 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 ABRQ12979 859 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 MAPK11Q15759 364 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 ZNF773Q6PK81 442 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 GPR156Q8NFN8 814 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 GTF2H4Q92759 462 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 LHPPQ9H008 270 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 ACTL8Q9H568 366 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 IL37Q9NZH6 218 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 SLC22A14Q9Y267 594 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 DLGAP4Q9Y2H0 992 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 ANKRD33BA6NCL7 494 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 CA5AP35218 305 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 CTBSQ01459 385 aa12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 SF1Q15637 639 aaKnown RBP12.33□□□□□ -0.44
RAB3IP-201ENST00000247833 SUSD1Q6UWL2 747 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms