RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 IQCF5A8MTL0 148 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 ZNF682O95780 498 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 PFKLP17858 780 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 BRCC3P46736 316 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 KRR1Q13601 381 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 ZNF181Q2M3W8 571 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 PM20D1Q6GTS8 502 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 NECAB2Q7Z6G3 386 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 APOBEC3FQ8IUX4 373 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 NLGN4XQ8N0W4 816 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 LINC01465Q8N7H1 131 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 C3orf58Q8NDZ4 430 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 OR6J1Q8NGC5 347 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 STAG3L4Q8TBR4 150 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 STON2Q8WXE9 905 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 E5RI56 91 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 E9PAM4 449 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 LOC110117498-PIK3R3F6TDL0 507 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 GPR39O43194 453 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 MATN4O95460 622 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 PTTG1O95997 202 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 YES1P07947 543 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 DARSP14868 501 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 WARSP23381 471 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 GRIK1P39086 918 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 EEFSECP57772 596 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 GALNT1Q10472 559 aaPredicted RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 ZNF267Q14586 743 aaPredicted RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 SUZ12Q15022 739 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 PUS10Q3MIT2 529 aaKnown RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 MRNIPQ6NTE8 343 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 ZNF517Q6ZMY9 492 aaPredicted RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 GALNT7Q86SF2 657 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 ANKRD46Q86W74 232 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 PROSER1Q86XN7 944 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 IL17RDQ8NFM7 739 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 NEDD4LQ96PU5 975 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 SCN3BQ9NY72 215 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 ABI2Q9NYB9 513 aaPredicted RBP13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 ZNF225Q9UK10 706 aa13.89□□□□□ -0.19
PCDHB3-201ENST00000231130 NDUFS3O75489 264 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 GABARAPO95166 117 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 OR4Q2P0C623 313 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 PSKH1P11801 424 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 HTR3AP46098 478 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 RPL38P63173 70 aaKnown RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 PTPRRQ15256 657 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 PTPRNQ16849 979 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 ALKAL1Q6UXT8 129 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 NRARPQ7Z6K4 114 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 RAB43Q86YS6 212 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 GLB1L3Q8NCI6 653 aaPredicted RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 DYNC2LI1Q8TCX1 351 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 MBOAT4Q96T53 435 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 B3GNT4Q9C0J1 378 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 IKZF5Q9H5V7 419 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 KAT8Q9H7Z6 458 aaKnown RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 MAGEL2Q9UJ55 1249 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 PTGESO14684 152 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 BCKDKO14874 412 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 NIPSNAP2O75323 286 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 B3GAT3O94766 335 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 FGF4P08620 206 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 CTSHP09668 335 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 HSMCR30P0CW71 290 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 MSH3P20585 1137 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 DNAJB1P25685 340 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 AIF1P55008 147 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 EMX2Q04743 252 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 DPP9Q86TI2 863 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 PARP16Q8N5Y8 322 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 SIDT2Q8NBJ9 832 aaKnown RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 GIPC2Q8TF65 315 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 SMARCD1Q96GM5 515 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 TSGA13Q96PP4 275 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 ATOH8Q96SQ7 321 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 SLC25A51Q9H1U9 297 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 FAM124BQ9H5Z6 455 aaPredicted RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 NECTIN3Q9NQS3 549 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 AGAP5A6NIR3 686 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 TREHO43280 583 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 AIREO43918 545 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 EEDO75530 441 aaKnown RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 ARHGEF15O94989 841 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 SLC25A27O95847 323 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 NTRK1P04629 796 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 C7P10643 843 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 POLR2CP19387 275 aaPredicted RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 AP5B1Q2VPB7 878 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 ALFQ53S48 1182 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 KDELC1Q6UW63 502 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 TOP6BLQ8N6T0 577 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 EFHBQ8N7U6 833 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 SIMC1Q8NDZ2 872 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 FERD3LQ96RJ6 166 aa13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 BARD1Q99728 777 aaKnown RBP13.88□□□□□ -0.19
PCDHB3-201ENST00000231130 CATSPERZQ9NTU4 200 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms