RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 GZMKP49863 264 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 INCA1Q0VD86 236 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 MFSD10Q14728 455 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 KLHL12Q53G59 568 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 B3GNT9Q6UX72 402 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 PLCZ1Q86YW0 608 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 AGBL3Q8NEM8 1001 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 CCNB1IP1Q9NPC3 277 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 RNF19AQ9NV58 838 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 NLKQ9UBE8 527 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 PKP3Q9Y446 797 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 PRKAB1Q9Y478 270 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 SLC9A3R1O14745 358 aaPredicted RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 MT-CYBP00156 380 aaPredicted RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 SSTR2P30874 369 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 PPP3CCP48454 512 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF789Q5FWF6 425 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 DCAF15Q66K64 600 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 LINC00469Q8N7U9 141 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 PAPD5Q8NDF8 572 aaKnown RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 OR4M1Q8NGD0 313 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 RNF139Q8WU17 664 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 DPF3Q92784 378 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 GLIS2Q9BZE0 524 aaPredicted RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 DEFB129Q9H1M3 183 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 CLEC4MQ9H2X3 399 aaPredicted RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 RNF121Q9H920 327 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 CARS2Q9HA77 564 aaKnown RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 KRT84Q9NSB2 600 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 TAS2R16Q9NYV7 291 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 STOML2Q9UJZ1 356 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 CNTNAP1P78357 1384 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 STSP08842 583 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 GRK5P34947 590 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 SLC6A3Q01959 620 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 ITKQ08881 620 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 DACT2Q5SW24 774 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 TIGD7Q6NT04 549 aaPredicted RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 PIM3Q86V86 326 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 KIF18BQ86Y91 864 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 OR5K1Q8NHB7 308 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 ASB15Q8WXK1 588 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 BARD1Q99728 777 aaKnown RBP14.38□□□□□ -0.11
PTPRA-201ENST00000216877 FSD1LQ9BXM9 530 aa14.38□□□□□ -0.11
PTPRA-201ENST00000216877 PDE9AO76083 593 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 RFX2P48378 723 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 ETV1P50549 477 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 CDH17Q12864 832 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 PCID2Q5JVF3 399 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 TRIQKQ629K1 86 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 OTOP2Q7RTS6 562 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 PRSS48Q7RTY5 328 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 SLC22A9Q8IVM8 553 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 PHACTR4Q8IZ21 702 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 RNF149Q8NC42 400 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 OR6B3Q8NGW1 331 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 TRMT61AQ96FX7 289 aaKnown RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 ASB2Q96Q27 587 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 FICDQ9BVA6 458 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 C11orf54Q9H0W9 315 aaPredicted RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 KCNN2Q9H2S1 579 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 CDCP1Q9H5V8 836 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 RPF1Q9H9Y2 349 aaKnown RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 FBXO10Q9UK96 956 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 FABP12A6NFH5 140 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 TRIM77I1YAP6 450 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 TREHO43280 583 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 UGT2B15P54855 530 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 RPL6Q02878 288 aaKnown RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 MVKQ03426 396 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 NKG7Q16617 165 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 TSTQ16762 297 aaKnown RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 DLK2Q6UY11 383 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 MFSD6LQ8IWD5 586 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 LAX1Q8IWV1 398 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF431Q8TF32 576 aaPredicted RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 MYOZ2Q9NPC6 264 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 SCML1Q9UN30 329 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 TOR1AO14656 332 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 B4GALT4O60513 344 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 EDN1P05305 212 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 PRKG2Q13237 762 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 CDH18Q13634 790 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 SNAPC1Q16533 368 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 NBPF12Q5TAG4 269 aaPredicted RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 MAP1SQ66K74 1059 aaPredicted RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 GALNT10Q86SR1 603 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 LRRC71Q8N4P6 559 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 SLC37A3Q8NCC5 494 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 LHFPL5Q8TAF8 219 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 ZNF675Q8TD23 568 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 ANKRD49Q8WVL7 239 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 REXO5Q96IC2 774 aaKnown RBP14.37□□□□□ -0.11
PTPRA-201ENST00000216877 IKZF3Q9UKT9 509 aa14.37□□□□□ -0.11
PTPRA-201ENST00000216877 A0A0U1RQS6 177 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 M0R129 80 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 DFNA5O60443 496 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SLC22A5O76082 557 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 CDK14O94921 469 aa14.36□□□□□ -0.11
PTPRA-201ENST00000216877 SERPINA1P01009 418 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms