RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CCDC138Q96M89 665 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 RPP25Q9BUL9 199 aaKnown RBP13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 DNAJC11Q9NVH1 559 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 TMEM181Q9P2C4 612 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 ANKRD12Q6UB98 2062 aa13.97□□□□□ -0.17
RTFDC1-201ENST00000023939 FAM234BA2RU67 622 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 E7ENX8 843 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 ANHXE9PGG2 379 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 K7ESM1 405 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 ANGPT2O15123 496 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 UGDHO60701 494 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 RNASEH1O60930 286 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 XRCC1P18887 633 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 C5AR1P21730 350 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 MAP4P27816 1152 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 TEAD1P28347 426 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 KIR2DL1P43626 348 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 RGS19P49795 217 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 MAD2L1Q13257 205 aaPredicted RBP13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 COL19A1Q14993 1142 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 NR6A1Q15406 480 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 CST6Q15828 149 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 AP5B1Q2VPB7 878 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 CMPK2Q5EBM0 449 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 SAMD4BQ5PRF9 694 aaKnown RBP13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 AGBL4Q5VU57 503 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 SNX31Q8N9S9 440 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 ASB9Q96DX5 294 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 SPDL1Q96EA4 605 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 COX14Q96I36 57 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 ACTR8Q9H981 624 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 GID8Q9NWU2 228 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 GULP1Q9UBP9 304 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 CD300AQ9UGN4 299 aa13.96□□□□□ -0.17
RTFDC1-201ENST00000023939 LRRK1Q38SD2 2015 aa13.96□□□□□ -0.18
RTFDC1-201ENST00000023939 ANTXRLA6NF34 631 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ANKRD28O15084 1053 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 EEDO75530 441 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 PRPH2P23942 346 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 GALK1P51570 392 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 KCNK10P57789 538 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 TAS2R38P59533 333 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 DLX2Q07687 328 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 TRAP1Q12931 704 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 GTF2H3Q13889 308 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 VPS26BQ4G0F5 336 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ICE2Q659A1 982 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 NEK5Q6P3R8 708 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 LRRC74BQ6ZQY2 392 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 CHPFQ8IZ52 775 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 AADATQ8N5Z0 425 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 PROKR1Q8TCW9 393 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 KCNV2Q8TDN2 545 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 SLC26A7Q8TE54 656 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 FAM131CQ96AQ9 280 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 HIC2Q96JB3 615 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 MSLNLQ96KJ4 702 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 FOPNLQ96NB1 174 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 NECTIN4Q96NY8 510 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 OR2AG1Q9H205 316 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ATXN10Q9UBB4 475 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ABCD2Q9UBJ2 740 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 KLQ9UEF7 1012 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 K7EQS6 105 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 FXYD1O00168 92 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 NPPAP01160 153 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 JAK1P23458 1154 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 GNPDA1P46926 289 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 PREPP48147 710 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 POLR2JP52435 117 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 NME5P56597 212 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 PFN3P60673 137 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 UFM1P61960 85 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 MS4A2Q01362 244 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ABRQ12979 859 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 PRKG2Q13237 762 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 HTR4Q13639 388 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 FLOT2Q14254 428 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 TRIM25Q14258 630 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 C2orf27AQ580R0 203 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ZFP1Q6P2D0 407 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 XKR5Q6UX68 686 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ZFAND4Q86XD8 727 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 TDHQ8IZJ6 230 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF513Q8N8E2 541 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 TEX37Q96LM6 180 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 FBRSQ9HAH7 460 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ADA2Q9NZK5 511 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 ZNF490Q9ULM2 529 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 SNX6Q9UNH7 406 aa13.95□□□□□ -0.18
RTFDC1-201ENST00000023939 CKAP5Q14008 2032 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 H3BM21 787 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 FFAR3O14843 346 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 MID1O15344 667 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 GPR42O15529 346 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 LTBRP36941 435 aa13.94□□□□□ -0.18
RTFDC1-201ENST00000023939 TLR1Q15399 786 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms