RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Dusp15Q8R4V2 235 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Otud7aQ8R554 926 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 EdaraddQ8VHX2 208 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 MtapQ9CQ65 283 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Ppp6cQ9CQR6 305 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 PigkQ9CXY9 395 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Scamp4Q9JKV5 230 aa9.71□□□□□ -0.85
Ccdc38-201ENSMUST00000092215 Anapc1P53995 1944 aaKnown RBP9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Phf11A6H5X4 337 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cped1B2RX70 1026 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pgbd5D3YZI9 523 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rap1gds1E9Q912 607 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Raph1F2Z3U3 1266 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gm3542K7N6U2 270 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Vmn2r4K7N784 913 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tspan6O70401 245 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PgrQ00175 926 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 DselQ0VBN2 1207 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Lrriq3Q14DL3 633 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Taar7fQ5QD08 358 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Scaf4Q6PFF0 1209 aaKnown RBP9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fbxo22Q78JE5 402 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sdr16c5Q7TQA3 309 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cdhr1Q8VHP6 859 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cyp2j9Q924D1 502 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tomm70Q9CZW5 611 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Terb2Q9D494 218 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Socs6Q9JLY0 533 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Golga4Q91VW5 2238 aa9.71□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Scgb2b21A0A087WQA9 112 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zmynd12A2BGJ5 363 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Osbpl8B9EJ86 889 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Gm3526E9PZM0 191 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Csf2rb2P26954 878 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Bcl2a1Q07440 172 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Osgin2Q3TEE9 550 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Eef2kmtQ3UZW7 335 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 CopaQ8CIE6 1224 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Nfatc4Q8K120 901 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mrps9Q9D7N3 390 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 1700086D15RikQ9D9E9 151 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Pdcd7Q9WTY1 482 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ttll2A4Q9E4 540 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Acbd4E9Q289 327 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Zfp597E9Q6S0 419 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 C130060K24RikG3UWA8 416 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 P01669 111 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Srp54P14576 504 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Bmp7P23359 430 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Hif3aQ0VBL6 662 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fgfr3Q61851 801 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Foxl1Q64731 336 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rps9Q6ZWN5 194 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sra1Q80VJ2 232 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tyw1Q8BJM7 721 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Akr1c20Q8VC77 323 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Epb41l4bQ9JMC8 527 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tada2bD3Z4Z0 420 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Capn5O08688 640 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Trove2O08848 538 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Kcnk4O88454 398 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tmco2P0C1V4 183 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ephx2P34914 554 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Abce1P61222 599 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ptpn21Q62136 1176 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ubtd2Q6PGH0 234 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ubfd1Q78JW9 368 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 LnpepQ8C129 1025 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 PreplQ8C167 725 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Exd2Q8VEG4 650 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Trim7Q923T7 510 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Adgrl4Q923X1 739 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ms4a10Q99N03 267 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mrpl1Q99N96 336 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Fgfr1op2Q9CRA9 253 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sun1Q9D666 913 aaKnown RBP9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Mcemp1Q9D8U6 183 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rsrc1Q9DBU6 334 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ppp1r2Q9DCL8 206 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tp73Q9JJP2 631 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cdh22Q9WTP5 813 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Frem2Q6NVD0 3160 aa9.7□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ssxb6A2BI74 170 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tyrp1P07147 537 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Ly6fP35460 134 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Emp1P47801 160 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Wbp1P97764 304 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cdv3Q4VAA2 281 aaKnown RBP9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Scn2bQ56A07 215 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Slc10a7Q5PT53 340 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Klra8Q60682 266 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Tra2aQ6PFR5 281 aaKnown RBP9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rslcan18Q7M6X5 460 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Cplx4Q80WM3 160 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rtp2Q80ZI2 223 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rab43Q8CG50 210 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Adgrg1Q8K209 687 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Scara5Q8K299 491 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Rpe65Q91ZQ5 533 aa9.69□□□□□ -0.86
Ccdc38-201ENSMUST00000092215 Sohlh2Q9D489 467 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms