RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Nt5dc3Q3UHB1 546 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gtpbp2Q3UJK4 602 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Ccdc190Q3URK1 288 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Shroom1Q5SX79 823 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Arhgef39Q66JY6 344 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Atg9aQ68FE2 551 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Znf182Q6P560 627 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Zbtb5Q7TQG0 670 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Znf12Q7TSI0 686 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Nipa1Q8BHK1 323 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Srp68Q8BMA6 625 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Dus1lQ8C2P3 475 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Tmem200aQ8C817 491 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Adam32Q8K410 754 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Trim31Q8R0K2 507 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Slc12a8Q8VI23 705 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Hyal6Q9D4E9 494 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Cdyl2Q9D5D8 503 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Ppil3Q9D6L8 161 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Exosc8Q9D753 276 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Dnaja4Q9JMC3 397 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Znf354bQ9QXT9 601 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm2022A0A1Y7VLT7 144 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup18A2BIM8 181 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup10A2BIN1 180 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup14A2CEK7 180 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup15A9R9W0 180 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup17B5X0G2 180 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Serpina3iD3Z450 408 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Slc4a9E9PUP3 929 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Olfr552E9Q545 317 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Rhox13F6YCR7 232 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm2075J3QMW5 144 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm21789J3QMZ1 123 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Zfp616J3QN14 987 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm6803J3QPI8 144 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm21870J3QPN2 123 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Itgb3O54890 787 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Pgrmc1O55022 195 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Slc6a20bO88575 635 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Il3P01586 166 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup6P02762 180 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup11P04938 181 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Slc3a2P10852 526 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mup1P11588 180 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Pou4f1P17208 421 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mgat1P27808 447 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Rab24P35290 203 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Npas1P97459 594 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 AmbpQ07456 349 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 BB287469Q3UT53 144 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm21320Q4FZE8 181 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Zc3h12cQ5DTV4 884 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Ei24Q61070 340 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Six2Q62232 296 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Itga3Q62470 1053 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Rab3ipQ68EF0 428 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Dpp10Q6NXK7 797 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Cfap97Q6ZPR1 541 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mzt1Q8BUR9 78 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Ska3Q8C263 411 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Apol9bQ8C7I4 310 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Lrit1Q8K099 624 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Utp4Q8R2N2 686 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Apol9aQ8VDU3 310 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gatad2bQ8VHR5 594 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Cdkal1Q91WE6 578 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Atg13Q91YI1 516 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Syt12Q920N7 421 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Kif19Q99PT9 997 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mrpl41Q9CQN7 135 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 3110001I22RikQ9CZ70 312 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Mrto4Q9D0I8 239 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Upk1aQ9D132 257 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Q9D4W2 315 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Idh3aQ9D6R2 366 aaKnown RBP7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Dnajb8Q9QYI7 227 aa7.06□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Simc1E9Q6E9 1354 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm16432A0A0A6YXX9 775 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Znf518bB2RRE4 1077 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gabrr3B2RXA8 464 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Ces1bD3Z5G7 567 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Olfr1425K7N659 312 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Gm17026K7N6Z0 213 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Olfr1154L7MU57 310 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Capn1O35350 713 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Psmb10O35955 273 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Fkbp7O54998 218 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 H2-D1P14427 368 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 TktP40142 623 aaKnown RBP7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Cav3P51637 151 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 SnnP61807 88 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Tra2bP62996 288 aaKnown RBP7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 NfibP97863 570 aaKnown RBP7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Snai1Q02085 264 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Pdss2Q33DR3 401 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 1700066B19RikQ3TS39 127 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 MyrflQ3UN70 904 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Taar7dQ5QD10 358 aa7.05□□□□□ -1.28
Cntn1-202ENSMUST00000068378 Tgoln2Q62314 363 aa7.05□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms