RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Olfr1128Q7TR47 311 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tmem202Q80W35 275 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 PeloQ80X73 385 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fam129bQ8R1F1 749 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr170Q8VGL6 313 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gjd3Q91YD1 278 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Col25a1Q99MQ5 666 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 PglsQ9CQ60 257 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gpr45Q9EQQ4 373 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Adam17Q9Z0F8 827 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cacna1sQ02789 1880 aa10.13□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tas2r122D3YU55 309 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cyp1a1P00184 524 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cd3gP11942 182 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tuba4aP68368 448 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr681Q3SXH8 315 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Cfhr2Q4LDF6 332 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Klra2Q60660 288 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Bdkrb1Q61125 334 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1080Q7TR67 313 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 B3gnt5Q8BGY6 376 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Elp6Q8BK75 266 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pi4k2bQ8CBQ5 469 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Bloc1s5Q8R015 185 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr679Q8VGV0 315 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fastkd2Q922E6 689 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 RhouQ9EQT3 261 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Plch1Q4KWH5 1682 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Itih4A6X935 942 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Arhgap36B1AUC7 590 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc6a6O35316 621 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pdlim1O70400 327 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ulk1O70405 1051 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 ThbdP15306 577 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Elk4P41158 430 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fgf1P61148 155 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Six3Q62233 333 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ift52Q62559 426 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Capn3Q64691 821 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Dennd5aQ6PAL8 1287 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc16a9Q7TM99 508 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Zfp606Q7TSV0 794 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Efr3aQ8BG67 819 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ptk7Q8BKG3 1062 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc17a6Q8BLE7 582 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Saysd1Q8K190 188 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr1019Q8VGS3 310 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fars2Q99M01 451 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Fibcd1A2AV25 459 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 2610028H24RikG5E8K1 270 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm11236J3QMS7 360 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 LvrnQ2KHK3 559 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Esrp1Q3US41 680 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 H2-Q2Q4KN81 360 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Nr1d2Q60674 576 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rnf220Q6PDX6 566 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Kiaa0895Q7TQE7 519 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 4933430I17RikQ8BHW4 495 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Zbtb46Q8BID6 600 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pik3cbQ8BTI9 1064 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 RhdQ8CF94 418 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gin1Q8K259 518 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfr846Q8VET8 312 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pcdhac1Q91Y10 964 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 TmlheQ91ZE0 421 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Ferd3lQ923Z4 168 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rpl17Q9CPR4 184 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Dgat2Q9DCV3 388 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 IcmtQ9EQK7 283 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Rsc1a1Q9ER99 582 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gfra4Q9JJT2 260 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Abhd1Q9QZC8 412 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Myh11O08638 1972 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Skint1A7TZE6 364 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mkln1O89050 735 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Grik2P39087 908 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pim3P58750 326 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Lsm3P62311 102 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Dppa5bP85965 119 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Olfml2bQ3V1G4 746 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Q8BZE1 841 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pcdhb8Q91XZ2 779 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Q922R1 422 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Tas1r1Q99PG6 842 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mgat4dQ9D4R2 373 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Armc1Q9D7A8 282 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Usp12Q9D9M2 370 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Clic1Q9Z1Q5 241 aaKnown RBP10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Dpp6Q9Z218 804 aa10.12□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Gm3604A0A087WPN2 559 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pole2O54956 527 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 P01652 108 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 H2-Q8P14430 326 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Hoxa2P31245 372 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Pxmp2P42925 194 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 H2-Q6P79568 326 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Slc22a15Q504N2 544 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Mup20Q5FW60 181 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 PkdccQ5RJI4 492 aa10.11□□□□□ -0.79
Ccdc40-201ENSMUST00000035935 Klra4Q60651 263 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms