RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Zc3h12bG3X9I7 835 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 MlxO08609 298 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Clk4O35493 481 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zfp60P16374 707 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 DbiP31786 87 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Impdh1P50096 514 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 PctpP53808 214 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 GscQ02591 256 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Csn1s2aQ02862 184 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Alg11Q3TZM9 492 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mfsd3Q5U419 412 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ttf1Q62187 859 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cypt2Q6P924 180 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gxylt2Q810K9 444 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rab9bQ8BHH2 201 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Znf592Q8BHZ4 1262 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Vrk2Q8BN21 503 aaKnown RBP9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ildr1Q8CBR1 537 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fam129bQ8R1F1 749 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Akr1d1Q8VCX1 325 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ddx50Q99MJ9 734 aaKnown RBP9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 4933436I01RikQ9D3T1 429 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 ItpaQ9D892 198 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Padi4Q9Z183 666 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Znf609Q8BZ47 1413 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fam83cA2ARK0 776 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 PiggD3Z3Y1 983 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm8356J3QPD3 205 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ifnar2O35664 513 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Scrg1O88745 98 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fabp3P11404 133 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 RapsnP12672 412 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Elk4P41158 430 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ctps1P70698 591 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 ArvcfP98203 962 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc22a23Q3UHH2 689 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Psg29Q3URN6 468 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ecm1Q61508 559 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Prmt6Q6NZB1 378 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Zfp943Q6NZP4 507 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Oog2Q7TPX8 476 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tmem259Q8CIV2 574 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Taf10Q8K0H5 218 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc35f5Q8R314 524 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Elovl6Q920L5 267 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rnf181Q9CY62 165 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 SgshQ9EQ08 502 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Orc5Q9WUV0 435 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr239A0PK55 315 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm7233E9PZI8 198 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm9732F6QVC4 198 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr55K7N6Q1 315 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm8104K7N744 198 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dusp8O09112 663 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Dsg2O55111 1122 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fth1P09528 182 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ifngr1P15261 477 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Ggta1P23336 394 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Yap1P46938 488 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Matn1P51942 500 aaKnown RBP9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Coq10bQ3THF9 240 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mkrn3Q60764 544 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Scaf8Q6DID3 1268 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Znf513Q6PD29 541 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 MogsQ80UM7 834 aaKnown RBP9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gpr158Q8C419 1200 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Spin4Q8K1L2 249 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tcf7l2Q924A0 459 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Tmem138Q9D6G5 162 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc25a19Q9DAM5 318 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Uqcrc2Q9DB77 453 aaKnown RBP9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Slc34a2Q9DBP0 697 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cdc40Q9DC48 579 aaKnown RBP9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Trpv4Q9EPK8 871 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Bin3Q9JI08 253 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rgs1Q9JL25 209 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 MycsQ9Z304 431 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Spata31d1aE9QA35 1336 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cdc42bpaQ3UU96 1719 aa9.02□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Fam171a2A2A699 822 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 F2P19221 618 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cers1P27545 350 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Mmp3P28862 477 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Hoxa11P31311 313 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 NogP97466 232 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cdk18Q04899 451 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Trcg1Q58Y74 825 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Xkr4Q5GH67 647 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Gm11992Q5SS90 291 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Itga3Q62470 1053 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 CilpQ66K08 1184 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Rasgrp3Q6NZH9 691 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Olfr533Q7TRT7 320 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Nup54Q8BTS4 510 aaKnown RBP9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Cyp51a1Q8K0C4 503 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Sash3Q8K352 380 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Angptl7Q8R1Q3 337 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 D6Wsu163eQ91YN0 552 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Camk1Q91YS8 374 aa9.01□□□□□ -0.97
Ccdc47-201ENSMUST00000002043 Pacsin3Q99JB8 424 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms