RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 GTF2H4Q92759 462 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 ISG20Q96AZ6 181 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 ZBTB18Q99592 522 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 RIBC2Q9H4K1 309 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 MARCH5Q9NX47 278 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 OPTCQ9UBM4 332 aa13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 PTBP2Q9UKA9 531 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-228ENST00000636610 OCM2P0CE71 109 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 OCMP0CE72 109 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 DCKP27707 260 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 AKT1P31749 480 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 TGFBR1P36897 503 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 HSPA14Q0VDF9 509 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 GPR17Q13304 367 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 SMN1Q16637 294 aaKnown RBP13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 BROXQ5VW32 411 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 TTC30BQ8N4P2 665 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 DDHD1Q8NEL9 900 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 EPS8L2Q9H6S3 715 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 RASSF1Q9NS23 344 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 CD84Q9UIB8 345 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 MBD1Q9UIS9 605 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 CRLS1Q9UJA2 301 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 PNMA8BQ9ULN7 279 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 PCDHB14Q9Y5E9 798 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 ANKRD28O15084 1053 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 PFDN6O15212 129 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 HTR1AP08908 422 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 CDKN2CP42773 168 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 PHC1P78364 1004 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 HECTD3Q5T447 861 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 GRAMD4Q6IC98 578 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 ZNF773Q6PK81 442 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 CRTC3Q6UUV7 619 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 USP51Q70EK9 711 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 UTS2BQ765I0 119 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 ZNF554Q86TJ5 538 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 SPARTQ8N0X7 666 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 FBXO22Q8NEZ5 403 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 TUBA8Q9NY65 449 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 LRFN2Q9ULH4 789 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 ARIH1Q9Y4X5 557 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 NEUROG3Q9Y4Z2 214 aa13.75□□□□□ -0.21
CACNA1A-228ENST00000636610 ELOVL7A1L3X0 281 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 RAD51BO15315 384 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 TBC1D4O60343 1298 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 OTCP00480 354 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 F11P03951 625 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 UMPSP11172 480 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 MBL2P11226 248 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 FUT4P22083 530 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 ITPKAP23677 461 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CRHBPP24387 322 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 EPHA2P29317 976 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 AQP1P29972 269 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 PTGER3P43115 390 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 RAD23AP54725 363 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 SLC14A1Q13336 389 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 AQP6Q13520 282 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CYP2A13Q16696 494 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CXorf57Q6NSI4 855 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 APCDD1Q8J025 514 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 TMCO5AQ8N6Q1 288 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 ZNF555Q8NEP9 628 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 FAM120BQ96EK7 910 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 MBOAT4Q96T53 435 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 FEM1AQ9BSK4 669 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 FUNDC2Q9BWH2 189 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 IL17CQ9P0M4 197 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 BAG5Q9UL15 447 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 EIF3LQ9Y262 564 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 DHRS7Q9Y394 339 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 PCDHB7Q9Y5E2 793 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 TANC1Q9C0D5 1861 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 ZNF840PA6NDX5 716 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CLDN11O75508 207 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CSKP41240 450 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 SMAD3P84022 425 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CDH18Q13634 790 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CHRNA6Q15825 494 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 TRIM71Q2Q1W2 868 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CES5AQ6NT32 575 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 TRIM74Q86UV6 250 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 TRIM73Q86UV7 250 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 OR13F1Q8NGS4 319 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 DPH2Q9BQC3 489 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 ATG10Q9H0Y0 220 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 PARVBQ9HBI1 364 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 PAK1IP1Q9NWT1 392 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 TRNAU1APQ9NX07 287 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CHCHD3Q9NX63 227 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 VNN3Q9NY84 501 aa13.74□□□□□ -0.21
CACNA1A-228ENST00000636610 CLEC4EQ9ULY5 219 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms