RNA–Protein interactions for RNA: ENST00000630585.1

UBA3-212, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 4 BASIC

Gene UBA3, Length 390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-212ENST00000630585 XKR8Q9H6D3 395 aa11.75□□□□□ -0.53
UBA3-212ENST00000630585 ACTR5Q9H9F9 607 aaPredicted RBP11.75□□□□□ -0.53
UBA3-212ENST00000630585 PIH1D1Q9NWS0 290 aaKnown RBP11.75□□□□□ -0.53
UBA3-212ENST00000630585 SMARCAL1Q9NZC9 954 aa11.75□□□□□ -0.53
UBA3-212ENST00000630585 ANKMY1Q9P2S6 941 aa11.75□□□□□ -0.53
UBA3-212ENST00000630585 SNX7Q9UNH6 387 aa11.75□□□□□ -0.53
UBA3-212ENST00000630585 SPTBN1Q01082 2364 aaKnown RBP11.75□□□□□ -0.53
UBA3-212ENST00000630585 CCDC78A2IDD5 438 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 MROH6A6NGR9 719 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 LIN7AO14910 233 aaPredicted RBP11.74□□□□□ -0.53
UBA3-212ENST00000630585 AP2A1O95782 977 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 PDGFAP04085 211 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 MSL3P1P0C860 447 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 PVRP15151 417 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 RORAP35398 523 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 NSG1P42857 185 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 LMAN1P49257 510 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 PGDP52209 483 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 GDF10P55107 478 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 ITGA1P56199 1179 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 SRSF1Q07955 248 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBA3-212ENST00000630585 KIF5AQ12840 1032 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 KLF1Q13351 362 aaPredicted RBP11.74□□□□□ -0.53
UBA3-212ENST00000630585 ITIH4Q14624 930 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 CPZQ66K79 652 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 LINC00523Q86TU6 105 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 HOOK3Q86VS8 718 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 ADGRF3Q8IZF5 1079 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 TXLNBQ8N3L3 684 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 TAB3Q8N5C8 712 aaPredicted RBP11.74□□□□□ -0.53
UBA3-212ENST00000630585 SLC35B2Q8TB61 432 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 ELMO1Q92556 727 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 BAG1Q99933 345 aaPredicted RBP11.74□□□□□ -0.53
UBA3-212ENST00000630585 TMEM121Q9BTD3 319 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 KLHL25Q9H0H3 589 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 PCMTD2Q9NV79 361 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 ACTR10Q9NZ32 417 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 TCFL5Q9UL49 500 aa11.74□□□□□ -0.53
UBA3-212ENST00000630585 PACSIN2Q9UNF0 486 aaPredicted RBP11.74□□□□□ -0.53
UBA3-212ENST00000630585 R3HDM2Q9Y2K5 976 aaKnown RBP11.74□□□□□ -0.53
UBA3-212ENST00000630585 PCDHGA9Q9Y5G4 932 aaKnown RBP11.74□□□□□ -0.53
UBA3-212ENST00000630585 CLEC18AA5D8T8 446 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 TTLL8A6PVC2 850 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 E7EQ34 232 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 QSOX1O00391 747 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 FTCDO95954 541 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 GAS8O95995 478 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 FTH1P02794 183 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 HBQ1P09105 142 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 PSMA3P25788 255 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 MSNP26038 577 aaKnown RBP11.73□□□□□ -0.53
UBA3-212ENST00000630585 SHMT2P34897 504 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 PTGIRP43119 386 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 CD97P48960 835 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 ZNF789Q5FWF6 425 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 SPESP1Q6UW49 350 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 CLEC18BQ6UXF7 455 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 CDHR3Q6ZTQ4 885 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 SYTL1Q8IYJ3 562 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 GPR135Q8IZ08 494 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 CLEC18CQ8NCF0 446 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 OR5AR1Q8NGP9 310 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 ADAMTS17Q8TE56 1095 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 N4BP2L2Q92802 583 aaPredicted RBP11.73□□□□□ -0.53
UBA3-212ENST00000630585 COL12A1Q99715 3063 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 DPH2Q9BQC3 489 aaPredicted RBP11.73□□□□□ -0.53
UBA3-212ENST00000630585 RBSNQ9H1K0 784 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 MLXIPLQ9NP71 852 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 ICKQ9UPZ9 632 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 ASF1AQ9Y294 204 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 SHANK1Q9Y566 2161 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 PRSS21Q9Y6M0 314 aa11.73□□□□□ -0.53
UBA3-212ENST00000630585 SPTAN1Q13813 2472 aaKnown RBP11.72□□□□□ -0.53
UBA3-212ENST00000630585 ICE1Q9Y2F5 2266 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
UBA3-212ENST00000630585 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
UBA3-212ENST00000630585 TCRBV7S2A1N4TA0A589 114 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 CCDC162PA2VCL2 907 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 OR51F1A6NGY5 319 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 ERI2A8K979 691 aaKnown RBP11.72□□□□□ -0.53
UBA3-212ENST00000630585 C9J4A7 227 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 ZNF749O43361 778 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 TMEM63AO94886 807 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 CAPN1P07384 714 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 AGXTP21549 392 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 ACADLP28330 430 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 STIP1P31948 543 aaKnown RBP11.72□□□□□ -0.53
UBA3-212ENST00000630585 CDH17Q12864 832 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 BRD3Q15059 726 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 PTCHD3Q3KNS1 767 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 SYTL3Q4VX76 610 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 CCDC38Q502W7 563 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 FAM198BQ6UWH4 519 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 PACS1Q6VY07 963 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 UNC5AQ6ZN44 842 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 TBC1D21Q8IYX1 336 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 FAM26EQ8N5C1 309 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 DNAAF3Q8N9W5 541 aa11.72□□□□□ -0.53
UBA3-212ENST00000630585 OR52K1Q8NGK4 314 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms