RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 RELTQ969Z4 430 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 ISG20Q96AZ6 181 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 IL17FQ96PD4 163 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 C1orf50Q9BV19 199 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 RBCK1Q9BYM8 510 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 MRPL40Q9NQ50 206 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 C4orf47A7E2U8 309 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 KRT33AO76009 404 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 LMNAP02545 664 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 UMPSP11172 480 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 BPIP17213 487 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 PIK3R1P27986 724 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SERPINB3P29508 390 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 CPA2P48052 419 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 PGFP49763 221 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SLC16A1P53985 500 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 ARHGAP8P85298 464 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 CTBSQ01459 385 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SRSF5Q13243 272 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 PWP1Q13610 501 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SLBPQ14493 270 aaKnown RBP eCLIP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 ACAP2Q15057 778 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 POMZP3Q6PJE2 187 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 KYAT3Q6YP21 454 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 ZNF662Q6ZS27 426 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 CLHC1Q8NHS4 586 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 CATSPER2Q96P56 530 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 PRDM8Q9NQV8 689 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 PPM1HQ9ULR3 514 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 TMCO1Q9UM00 188 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SUFUQ9UMX1 484 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 HS3ST2Q9Y278 367 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 TIMM22Q9Y584 194 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 MICAL3Q7RTP6 2002 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 TUBGCP6Q96RT7 1819 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 H3BNH8 94 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 H7BY64 318 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 UBXN8O00124 270 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 CLDN9O95484 217 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 GSTM1P09488 218 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 AVPR2P30518 371 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 PLGLB1Q02325 96 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 VAC14Q08AM6 782 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 PDK4Q16654 411 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 DEFB110Q30KQ9 67 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 C1orf146Q5VVC0 180 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 FSTL4Q6MZW2 842 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 BHLHB9Q6PI77 547 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 TTLL10Q6ZVT0 673 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 HSD11B1LQ7Z5J1 315 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 AMIGO1Q86WK6 493 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 TMEM139Q8IV31 216 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 SLC9A6Q92581 669 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 PPCDCQ96CD2 204 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 FAM122AQ96E09 287 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 CCDC138Q96M89 665 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 PRAP1Q96NZ9 151 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 HERPUD2Q9BSE4 406 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 TCF7L2Q9NQB0 619 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 ZSCAN32Q9NX65 697 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF490Q9ULM2 529 aaPredicted RBP8.9□□□□□ -0.99
HDAC9-229ENST00000622668 CORO1CQ9ULV4 474 aaPredicted RBP8.9□□□□□ -0.99
HDAC9-229ENST00000622668 SLC22A14Q9Y267 594 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 PADI2Q9Y2J8 665 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 PCDHGA11Q9Y5H2 935 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 SVILO95425 2214 aa8.9□□□□□ -0.99
HDAC9-229ENST00000622668 CCDC189A1A4V9 331 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 SOX1O00570 391 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 RRP9O43818 475 aaKnown RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 OR1I1O60431 355 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 OR6A2O95222 327 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 UQCRBP14927 111 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 RGRP47804 291 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 RASGEF1CQ8N431 466 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 ARL14Q8N4G2 192 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 SMPDL3BQ92485 455 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 ART4Q93070 314 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 KCNH6Q9H252 994 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 HHLA1C9JL84 531 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 TMX2-CTNND1H3BSU7 103 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 TM9SF1O15321 606 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 CDC123O75794 336 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 WFS1O76024 890 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 KLHL2O95198 593 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 ZNF682O95780 498 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 TFPIP10646 304 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 ITGA3P26006 1051 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 LAPTM5Q13571 262 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 TMEM259Q4ZIN3 620 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 PKDCCQ504Y2 493 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 SULT1C3Q6IMI6 304 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 AGTRAPQ6RW13 159 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 GLIS1Q8NBF1 620 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 ATP6V1C2Q8NEY4 427 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 OR13H1Q8NG92 308 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 PPP3R2Q96LZ3 170 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 NOL6Q9H6R4 1146 aaKnown RBP8.89□□□□□ -0.99
HDAC9-229ENST00000622668 CCDC167Q9P0B6 97 aa8.89□□□□□ -0.99
HDAC9-229ENST00000622668 SLC17A6Q9P2U8 582 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms