RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ERVMER34-1Q9H9K5 563 aa21.14■□□□□ 0.97
SGMS1-210ENST00000619438 PCDHGB2Q9Y5G2 931 aa21.14■□□□□ 0.97
SGMS1-210ENST00000619438 H7C0S8 307 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 ITGAXP20702 1163 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 PTDSS1P48651 473 aaKnown RBP21.13■□□□□ 0.97
SGMS1-210ENST00000619438 SLC34A1Q06495 639 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 ARMC12Q5T9G4 340 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 GCNT7Q6ZNI0 430 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 RIPOR1Q6ZS17 1223 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 PIM3Q86V86 326 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 MYLK4Q86YV6 388 aaPredicted RBP21.13■□□□□ 0.97
SGMS1-210ENST00000619438 DCP2Q8IU60 420 aaKnown RBP21.13■□□□□ 0.97
SGMS1-210ENST00000619438 PNPLA1Q8N8W4 532 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 GSTO2Q9H4Y5 243 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 ALG9Q9H6U8 611 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 SYTL2Q9HCH5 934 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 ACSS2Q9NR19 701 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 COQ6Q9Y2Z9 468 aa21.13■□□□□ 0.97
SGMS1-210ENST00000619438 CCDC189A1A4V9 331 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 H0Y3Z8 333 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 SDHDO14521 159 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 FLRT2O43155 660 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 HTRA2O43464 458 aaPredicted RBP21.12■□□□□ 0.97
SGMS1-210ENST00000619438 SMIM24O75264 130 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 KRT36O76013 467 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 PDHA1P08559 390 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 INHBCP55103 352 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 ABI3BPQ7Z7G0 1075 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 LPCAT1Q8NF37 534 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 CEP70Q8NHQ1 597 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 PTERQ96BW5 349 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 C19orf43Q9BQ61 176 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 PFDN6O15212 129 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 YKT6O15498 198 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 PCDHGA12O60330 932 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 FZD6O60353 706 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 ELFN1P0C7U0 828 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 C6P13671 934 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 MMP12P39900 470 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 RABIFP47224 123 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 TRAF2Q12933 501 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 ZRSR2Q15696 482 aaKnown RBP21.12■□□□□ 0.97
SGMS1-210ENST00000619438 ZNF678Q5SXM1 525 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 AAGABQ6PD74 315 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 CHSY3Q70JA7 882 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 TTC30BQ8N4P2 665 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 DENND6BQ8NEG7 585 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 CLPTM1LQ96KA5 538 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 DERL2Q9GZP9 239 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 MEAF6Q9HAF1 191 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 CYP4F12Q9HCS2 524 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 TAS2R13Q9NYV9 303 aa21.12■□□□□ 0.97
SGMS1-210ENST00000619438 FKBP6O75344 327 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 JUNP05412 331 aaKnown RBP21.11■□□□□ 0.97
SGMS1-210ENST00000619438 KCNC1P48547 511 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 EPHB1P54762 984 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 HERVK_113P63132 956 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 SIM1P81133 766 aaPredicted RBP21.11■□□□□ 0.97
SGMS1-210ENST00000619438 PDAP1Q13442 181 aaKnown RBP21.11■□□□□ 0.97
SGMS1-210ENST00000619438 CUL3Q13618 768 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 TRIP6Q15654 476 aaKnown RBP21.11■□□□□ 0.97
SGMS1-210ENST00000619438 PDCD2Q16342 344 aaPredicted RBP21.11■□□□□ 0.97
SGMS1-210ENST00000619438 CUZD1Q86UP6 607 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 GATAD2AQ86YP4 633 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 PELI3Q8N2H9 469 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 RSRC1Q96IZ7 334 aaKnown RBP21.11■□□□□ 0.97
SGMS1-210ENST00000619438 ERVK-6Q9BXR3 956 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 SHCBP1LQ9BZQ2 653 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 ZBTB26Q9HCK0 441 aa21.11■□□□□ 0.97
SGMS1-210ENST00000619438 PRPF19Q9UMS4 504 aaKnown RBP21.11■□□□□ 0.97
SGMS1-210ENST00000619438 LOC100653049A0A140TA62 436 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 GOLGA8CPA6NN73 597 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 KRT34O76011 436 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 PGLSO95336 258 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 SLC4A1P02730 911 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 VHLP40337 213 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 GRK6P43250 576 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 RXRGP48443 463 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 TTPAP49638 278 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 ADARP55265 1226 aaKnown RBP21.1■□□□□ 0.97
SGMS1-210ENST00000619438 ATP6V0D1P61421 351 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 BNIP3Q12983 259 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 INAVAQ3KP66 663 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 C1orf146Q5VVC0 180 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 DBX2Q6ZNG2 339 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 MBNL1Q9NR56 388 aaKnown RBP21.1■□□□□ 0.97
SGMS1-210ENST00000619438 B4GALT6Q9UBX8 382 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 PCOLCE2Q9UKZ9 415 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 COMMD10Q9Y6G5 202 aa21.1■□□□□ 0.97
SGMS1-210ENST00000619438 OAS3Q9Y6K5 1087 aaKnown RBP21.1■□□□□ 0.97
SGMS1-210ENST00000619438 SPEGQ15772 3267 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 SPAARA0A1B0GVQ0 90 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 NDUFS3O75489 264 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 CYP2A6P11509 494 aaPredicted RBP21.09■□□□□ 0.97
SGMS1-210ENST00000619438 THOP1P52888 689 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 NAA20P61599 178 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 LIPIQ6XZB0 460 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 DPPA4Q7L190 304 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 JADE3Q92613 823 aa21.09■□□□□ 0.97
SGMS1-210ENST00000619438 KIAA1191Q96A73 305 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms