RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 TNFRSF10CO14798 259 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 POP7O75817 140 aaKnown RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PAK4O96013 591 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NCF1P14598 390 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 EPB42P16452 691 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HNRNPA2B1P22626 353 aaKnown RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ACADLP28330 430 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HSD17B2P37059 387 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CCR10P46092 362 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 AGTR2P50052 363 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CLCNKAP51800 687 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CDH13P55290 713 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 BTKQ06187 659 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 C10orf62Q5T681 223 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 METRNLQ641Q3 311 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 OGFOD2Q6N063 350 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 XKR5Q6UX68 686 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 KIAA1324Q6UXG2 1013 aaKnown RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 Q7L0L9 218 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ASRGL1Q7L266 308 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CACUL1Q86Y37 369 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 BEND7Q8N7W2 519 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TRPC4APQ8TEL6 797 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 C19orf60Q96EN9 201 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NSUN5Q96P11 429 aaKnown RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 APOOQ9BUR5 198 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NUF2Q9BZD4 464 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 OR52A5Q9H2C5 316 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 LRMDAQ9H2I8 198 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SEMA4BQ9NPR2 832 aaPredicted RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MBNL1Q9NR56 388 aaKnown RBP12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GPRC5BQ9NZH0 403 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 DNAJC15Q9Y5T4 150 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HS3ST3A1Q9Y663 406 aa12□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 EML5Q05BV3 1969 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TP53BP1Q12888 1972 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 FANCMQ8IYD8 2048 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SERTM1A2A2V5 107 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TMEM202A6NGA9 273 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PRR19A6NJB7 356 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ARHGEF33A8MVX0 844 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NPIPB8E9PQR5 432 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CRCPO75575 148 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 APBB3O95704 486 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SEMA4FO95754 770 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CCND1P24385 295 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 AKT2P31751 481 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 MAGEA9P43362 315 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 RPS9P46781 194 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HSPA7P48741 367 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NCALDP61601 193 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SF3A3Q12874 501 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■□□ 18.6
NEDD8-MDP1-203ENST00000604306 GRIK2Q13002 908 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TRAF3Q13114 568 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 E2F2Q14209 437 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ARHGAP19Q14CB8 494 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HERC3Q15034 1050 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PDCD2Q16342 344 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 RBBP7Q16576 425 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 LSM12Q3MHD2 195 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 XKR7Q5GH72 579 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZNF648Q5T619 568 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 LARP4Q71RC2 724 aaKnown RBP eCLIP11.99□□□□□ -0.492e-13■■■■■ 29.6
NEDD8-MDP1-203ENST00000604306 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SYVN1Q86TM6 617 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TRIM74Q86UV6 250 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TWIST2Q8WVJ9 160 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 SKA2Q8WVK7 121 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CMTM5Q96DZ9 223 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PTCD3Q96EY7 689 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NSL1Q96IY1 281 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 C1orf21Q9H246 121 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 IPPKQ9H8X2 491 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 KLC4Q9NSK0 619 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 RIC8BQ9NVN3 520 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TAGLN3Q9UI15 199 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 NDRG2Q9UN36 371 aaKnown RBP11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ANGPTL3Q9Y5C1 460 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CAPN7Q9Y6W3 813 aa11.99□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 LRRC14BA6NHZ5 514 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 ZNF839A8K0R7 811 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TMEM233B4DJY2 109 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 OR7A17O14581 309 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CCNT2O60583 730 aaKnown RBP11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 C1orf105O95561 183 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 GUCA1CO95843 209 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CEACAM5P06731 702 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PRR35P0CG20 571 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 T-ENOLP0DO92 83 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HGFP14210 728 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 TARSP26639 723 aaKnown RBP11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 HTR1BP28222 390 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PTPN4P29074 926 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 CCNG1P51959 295 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PNLIPRP1P54315 467 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PFN3P60673 137 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PPP2CBP62714 309 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 PPP2CAP67775 309 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 FZD5Q13467 585 aa11.98□□□□□ -0.49
NEDD8-MDP1-203ENST00000604306 LRP8Q14114 963 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms