RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 FOXR1Q6PIV2 292 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 MAMSTRQ6ZN01 415 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 Q6ZSR6 202 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 ABI3BPQ7Z7G0 1075 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 FBXO15Q8NCQ5 510 aaPredicted RBP17.57■□□□□ 0.4
VRK3-225ENST00000601912 CADM4Q8NFZ8 388 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 FAM174AQ8TBP5 190 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 MAGEC3Q8TD91 643 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 ATL1Q8WXF7 558 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 CCDC138Q96M89 665 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 OR52A5Q9H2C5 316 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 CARS2Q9HA77 564 aaKnown RBP17.57■□□□□ 0.4
VRK3-225ENST00000601912 FGF22Q9HCT0 170 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 MID1IP1Q9NPA3 183 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 MRPL40Q9NQ50 206 aaKnown RBP17.57■□□□□ 0.4
VRK3-225ENST00000601912 KLC4Q9NSK0 619 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 DNAJC28Q9NX36 388 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 OPTCQ9UBM4 332 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 APOBEC2Q9Y235 224 aaKnown RBP17.57■□□□□ 0.4
VRK3-225ENST00000601912 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 ANGPTL3Q9Y5C1 460 aa17.57■□□□□ 0.4
VRK3-225ENST00000601912 IFRD1O00458 451 aaPredicted RBP17.56■□□□□ 0.4
VRK3-225ENST00000601912 AXIN1O15169 862 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 CCNT2O60583 730 aaKnown RBP17.56■□□□□ 0.4
VRK3-225ENST00000601912 STK16O75716 305 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 GGT5P36269 586 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 IFT88Q13099 833 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 GTF2H2Q13888 395 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 PTK2BQ14289 1009 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 RBBP7Q16576 425 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 C18orf21Q32NC0 220 aaPredicted RBP17.56■□□□□ 0.4
VRK3-225ENST00000601912 USP39Q53GS9 565 aaKnown RBP17.56■□□□□ 0.4
VRK3-225ENST00000601912 GTF2H2CQ6P1K8 395 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 XKR5Q6UX68 686 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 UNC5DQ6UXZ4 953 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 MBOAT1Q6ZNC8 495 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 PDZD3Q86UT5 571 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 OR2M4Q96R27 311 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 UHRF1Q96T88 793 aaPredicted RBP17.56■□□□□ 0.4
VRK3-225ENST00000601912 TRAF6Q9Y4K3 522 aa17.56■□□□□ 0.4
VRK3-225ENST00000601912 METTL12A8MUP2 240 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 K7EPI3 171 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 UBFD1O14562 309 aaKnown RBP17.55■□□□□ 0.4
VRK3-225ENST00000601912 C1orf105O95561 183 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 RPN2P04844 631 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 SLC35G4P0C7Q5 338 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 ACADLP28330 430 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 PIK3CGP48736 1102 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 SH3BP2P78314 561 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 SLC36A4Q6YBV0 504 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 CLYBLQ8N0X4 340 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 TEX9Q8N6V9 391 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 EDAQ92838 391 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 ATP6V1E2Q96A05 226 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 FBXL8Q96CD0 374 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 RMDN2Q96LZ7 410 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 RILPQ96NA2 401 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 TMEM79Q9BSE2 394 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 OSGEPL1Q9H4B0 414 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 KLQ9UEF7 1012 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 ASB1Q9Y576 335 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 TRPC5OSA6NMA1 111 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 K7ESF4 209 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 ZNF195O14628 629 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 DIAPH2O60879 1101 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 CRCPO75575 148 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 FGF4P08620 206 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 IDSP22304 550 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 BDKRB1P46663 353 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 PKNOX1P55347 436 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.55■□□□□ 0.4
VRK3-225ENST00000601912 C6orf89Q6UWU4 347 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 TRPM8Q7Z2W7 1104 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 GOLGA7Q7Z5G4 137 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 AGAP11Q8TF27 550 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 OR1E3Q8WZA6 343 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 TFGQ92734 400 aaPredicted RBP17.55■□□□□ 0.4
VRK3-225ENST00000601912 LRRC37BQ96QE4 947 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 ZDHHC5Q9C0B5 715 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 SLC32A1Q9H598 525 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 ZBTB26Q9HCK0 441 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 HEY2Q9UBP5 337 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 KCNK6Q9Y257 313 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 INVSQ9Y283 1065 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 ASF1AQ9Y294 204 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 FIS1Q9Y3D6 152 aa17.55■□□□□ 0.4
VRK3-225ENST00000601912 PPP6CO00743 305 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 KATNA1O75449 491 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 ESRRBO95718 433 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 OTCP00480 354 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 EPB42P16452 691 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 ARL1P40616 181 aaPredicted RBP17.54■□□□□ 0.4
VRK3-225ENST00000601912 GDF5P43026 501 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 IDH3AP50213 366 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 CLCNKAP51800 687 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 RPL6Q02878 288 aaKnown RBP17.54■□□□□ 0.4
VRK3-225ENST00000601912 EPGNQ6UW88 154 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 GPRIN3Q6ZVF9 776 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 LRRC70Q7Z2Q7 622 aa17.54■□□□□ 0.4
VRK3-225ENST00000601912 RD3Q7Z3Z2 195 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms