RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 ACADLP28330 430 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ARHGAP25P42331 645 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 CD151P48509 253 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 NR2C2P49116 596 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 PRLHRP49683 370 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 CDKN1CP49918 316 aaPredicted RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 DYNLT1P63172 113 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 DCDP81605 110 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 FANCCQ00597 558 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 PRKAA1Q13131 559 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 OLIG2Q13516 323 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 BOP1Q14137 746 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 TCEAL1Q15170 157 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 TAF1AQ15573 450 aaPredicted RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 SLC18A3Q16572 532 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 HIF1AQ16665 826 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 NKAIN1Q4KMZ8 207 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 LYPLAL1Q5VWZ2 237 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ZNF324BQ6AW86 544 aaPredicted RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 PID1Q7Z2X4 250 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 GLT6D1Q7Z4J2 308 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 RFX6Q8HWS3 928 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 KLHDC8BQ8IXV7 354 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ZADH2Q8N4Q0 377 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 OR4K2Q8NGD2 314 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 OR52E1Q8NGJ3 308 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 HM13Q8TCT9 377 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 BLOC1S5Q8TDH9 187 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 TFB1MQ8WVM0 346 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 FAR1Q8WVX9 515 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 MARVELD3Q96A59 401 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 OR2A14Q96R47 310 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 FERD3LQ96RJ6 166 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 C19orf43Q9BQ61 176 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 MAK16Q9BXY0 300 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 UNKQ9C0B0 810 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 NAT10Q9H0A0 1025 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 XKR8Q9H6D3 395 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ASB8Q9H765 288 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 MVB12BQ9H7P6 319 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 COG4Q9H9E3 785 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 FANCEQ9HB96 536 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ATP13A2Q9NQ11 1180 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ENAMQ9NRM1 1142 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 SPHK1Q9NYA1 384 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 ACTR10Q9NZ32 417 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 DHCR7Q9UBM7 475 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 FAM8A1Q9UBU6 413 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 LCMT1Q9UIC8 334 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 G3BP2Q9UN86 482 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 ICKQ9UPZ9 632 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 LUC7L2Q9Y383 392 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 BOLA1Q9Y3E2 137 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 PTRH2Q9Y3E5 179 aaKnown RBP5.9□□□□□ -1.46
VRK3-220ENST00000600259 PKP3Q9Y446 797 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 HYOU1Q9Y4L1 999 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 HEBP2Q9Y5Z4 205 aa5.9□□□□□ -1.46
VRK3-220ENST00000600259 CROCCQ5TZA2 2017 aa5.9□□□□□ -1.47
VRK3-220ENST00000600259 FER1L5A0AVI2 2057 aa5.9□□□□□ -1.47
VRK3-220ENST00000600259 GSAPA4D1B5 854 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 C5orf60A6NFR6 353 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 C2orf74A8MZ97 194 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 C9J4A7 227 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 AGPSO00116 658 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 SOCS6O14544 535 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 CST8O60676 142 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ZG16O60844 167 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 OR2B3O76000 313 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 IPO13O94829 963 aaKnown RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 SERPINC1P01008 464 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 KRT1P04264 644 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ALPPP05187 535 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 EDN3P14138 238 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 UGT2B7P16662 529 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 PSMA3P25788 255 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ITGA3P26006 1051 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 GRNP28799 593 aaKnown RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 PEBP1P30086 187 aaKnown RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 AKT1P31749 480 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 TSFMP43897 325 aaKnown RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 ZNF140P52738 457 aaPredicted RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 UBASH3AP57075 661 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 Q0VFX4 171 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 RPA4Q13156 261 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 PRKG2Q13237 762 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 MPP3Q13368 585 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 KYNUQ16719 465 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 ZFYVE27Q5T4F4 411 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 C1orf189Q5VU69 101 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 SARM1Q6SZW1 724 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 SPESP1Q6UW49 350 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 KIRREL2Q6UWL6 708 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 UNC5AQ6ZN44 842 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 COX15Q7KZN9 410 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 BZW1Q7L1Q6 419 aaKnown RBP5.89□□□□□ -1.47
VRK3-220ENST00000600259 OVCH1Q7RTY7 1134 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 TRIM73Q86UV7 250 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 AMIGO1Q86WK6 493 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 NXPE1Q8N323 547 aa5.89□□□□□ -1.47
VRK3-220ENST00000600259 C19orf47Q8N9M1 422 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms