RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 APOA4P06727 396 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 FAM87AP0C7U9 286 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 MGAT1P26572 445 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 SHMT2P34897 504 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 HSPA14Q0VDF9 509 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 SEMA3AQ14563 771 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 LINC00303Q3SY05 128 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 PTRHD1Q6GMV3 140 aaKnown RBP13.91□□□□□ -0.18
IRF3-224ENST00000599680 PWWP2BQ6NUJ5 590 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 C16orf46Q6P387 395 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 LRRC8BQ6P9F7 803 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 FBXO38Q6PIJ6 1188 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 ZNF534Q76KX8 674 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 TBC1D21Q8IYX1 336 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 ASZ1Q8WWH4 475 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 MAGOHBQ96A72 148 aaKnown RBP13.91□□□□□ -0.18
IRF3-224ENST00000599680 CARD6Q9BX69 1037 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 AP1M1Q9BXS5 423 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 XKR8Q9H6D3 395 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 KCND1Q9NSA2 647 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 SAMD15Q9P1V8 674 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 IL17BQ9UHF5 180 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 GNPTGQ9UJJ9 305 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 KCND3Q9UK17 655 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 CROTQ9UKG9 612 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 PADI1Q9ULC6 663 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 PCM1Q15154 2024 aa13.91□□□□□ -0.18
IRF3-224ENST00000599680 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 GOLGA6L10A0A0M3HER8 536 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 SLC5A10A0PJK1 596 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 PIPSLA2A3N6 862 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 BTN3A3O00478 584 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
IRF3-224ENST00000599680 NKX2-8O15522 239 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 KIF5CO60282 957 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 SCRG1O75711 98 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 NTRK1P04629 796 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 RPN2P04844 631 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 NMBRP28336 390 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 PRDX3P30048 256 aaKnown RBP13.9□□□□□ -0.18
IRF3-224ENST00000599680 CCR10P46092 362 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 CDC20Q12834 499 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 CASC4Q6P4E1 433 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 SDCCAG8Q86SQ7 713 aaPredicted RBP13.9□□□□□ -0.18
IRF3-224ENST00000599680 LDB1Q86U70 411 aaPredicted RBP13.9□□□□□ -0.18
IRF3-224ENST00000599680 MPP5Q8N3R9 675 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 RASGEF1CQ8N431 466 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 EXD3Q8N9H8 876 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 OR5K2Q8NHB8 316 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 N4BP2L2Q92802 583 aaPredicted RBP13.9□□□□□ -0.18
IRF3-224ENST00000599680 MS4A14Q96JA4 679 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 PPM1MQ96MI6 270 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 FAM117AQ9C073 453 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 MRM3Q9HC36 420 aaKnown RBP13.9□□□□□ -0.18
IRF3-224ENST00000599680 SYBUQ9NX95 663 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 BTRCQ9Y297 605 aa13.9□□□□□ -0.18
IRF3-224ENST00000599680 HEMK1Q9Y5R4 338 aaPredicted RBP13.9□□□□□ -0.18
IRF3-224ENST00000599680 CPNE3O75131 537 aaKnown RBP13.89□□□□□ -0.19
IRF3-224ENST00000599680 VAPBO95292 243 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 TIAF1O95411 115 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 PAMP19021 973 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 ACADLP28330 430 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 CCR7P32248 378 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 EIF3BP55884 814 aaKnown RBP13.89□□□□□ -0.19
IRF3-224ENST00000599680 NFATC3Q12968 1075 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 KCNJ11Q14654 390 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 MRNIPQ6NTE8 343 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 CCDC137Q6PK04 289 aaKnown RBP13.89□□□□□ -0.19
IRF3-224ENST00000599680 LRRC6Q86X45 466 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 SLC22A15Q8IZD6 547 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 ADGRF3Q8IZF5 1079 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 SLC35F6Q8N357 371 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 CFAP61Q8NHU2 1237 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 ZNF501Q96CX3 271 aaPredicted RBP13.89□□□□□ -0.19
IRF3-224ENST00000599680 PANX3Q96QZ0 392 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 SLC7A5P2Q9GIP4 190 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 SYTL2Q9HCH5 934 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 LHX9Q9NQ69 397 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 TREX1Q9NSU2 369 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 ACTR10Q9NZ32 417 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
IRF3-224ENST00000599680 SOX13Q9UN79 622 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 ICKQ9UPZ9 632 aa13.89□□□□□ -0.19
IRF3-224ENST00000599680 MRPS18BQ9Y676 258 aaKnown RBP13.89□□□□□ -0.19
IRF3-224ENST00000599680 SMG1Q96Q15 3661 aaKnown RBP13.89□□□□□ -0.19
IRF3-224ENST00000599680 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 TCRBV7S3A2A0A539 114 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 B8ZZF3 427 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 TMEM150CB9EJG8 249 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 BHMG1C9JSJ3 638 aaPredicted RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 KPNA5O15131 536 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 ST6GAL1P15907 406 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 CYP2A7P20853 494 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 COILP38432 576 aaPredicted RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 POLE2P56282 527 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 DNASE1L3Q13609 305 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 KCTD19Q17RG1 926 aaPredicted RBP13.88□□□□□ -0.19
IRF3-224ENST00000599680 DEFB109BQ30KR1 87 aa13.88□□□□□ -0.19
IRF3-224ENST00000599680 DNAJC21Q5F1R6 531 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms