RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 SLC35F6Q8N357 371 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 MPP5Q8N3R9 675 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 OTUD6BQ8N6M0 293 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 OR5AR1Q8NGP9 310 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 OR8K5Q8NH50 307 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 OR5K2Q8NHB8 316 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 ASZ1Q8WWH4 475 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 STARD8Q92502 1023 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 ANP32BQ92688 251 aaKnown RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 PPM1MQ96MI6 270 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 CATSPER2Q96P56 530 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 OSBPL9Q96SU4 736 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 KIFC1Q9BW19 673 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 CARD6Q9BX69 1037 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 SEMA4CQ9C0C4 833 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 XKR8Q9H6D3 395 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 FANCEQ9HB96 536 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 MRM3Q9HC36 420 aaKnown RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 SYBUQ9NX95 663 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 MARCH4Q9P2E8 410 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-203ENST00000593582 PADI1Q9ULC6 663 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 BTRCQ9Y297 605 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 CFAP46Q8IYW2 2715 aa14.82□□□□□ -0.04
TRIM28-203ENST00000593582 GOLGA6L10A0A0M3HER8 536 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 BTN3A1O00481 513 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 NDUFS3O75489 264 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 TIAF1O95411 115 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 APOA4P06727 396 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 PRKAR1AP10644 381 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 SFTPCP11686 197 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 CCR7P32248 378 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 SHMT2P34897 504 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 COILP38432 576 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-203ENST00000593582 MAGEA6P43360 314 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 GPR19Q15760 415 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 CYP1B1Q16678 543 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 ARMC3Q5W041 872 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 PTRHD1Q6GMV3 140 aaKnown RBP14.81□□□□□ -0.04
TRIM28-203ENST00000593582 MRNIPQ6NTE8 343 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 FBXO38Q6PIJ6 1188 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 SDCCAG8Q86SQ7 713 aaPredicted RBP14.81□□□□□ -0.04
TRIM28-203ENST00000593582 HOOK3Q86VS8 718 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 LRRC6Q86X45 466 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 ADGRF3Q8IZF5 1079 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 EXD3Q8N9H8 876 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 ACTRT1Q8TDG2 376 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 COG1Q8WTW3 980 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 MFSD3Q96ES6 412 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 NRTNQ99748 197 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 KCND1Q9NSA2 647 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 TRMT1Q9NXH9 659 aaKnown RBP14.81□□□□□ -0.04
TRIM28-203ENST00000593582 IL17BQ9UHF5 180 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 GNPTGQ9UJJ9 305 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 KCND3Q9UK17 655 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 CROTQ9UKG9 612 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 SOX13Q9UN79 622 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 ICKQ9UPZ9 632 aa14.81□□□□□ -0.04
TRIM28-203ENST00000593582 TDRKHQ9Y2W6 561 aaKnown RBP14.81□□□□□ -0.04
TRIM28-203ENST00000593582 FASNP49327 2511 aaKnown RBP14.8□□□□□ -0.04
TRIM28-203ENST00000593582 PIPSLA2A3N6 862 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 IQCF5A8MTL0 148 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 PFDN6O15212 129 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 NKX2-8O15522 239 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 AVILO75366 819 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 VAPBO95292 243 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 RPN2P04844 631 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 FAM87AP0C7U9 286 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 PAMP19021 973 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 TCN2P20062 427 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 TMED2Q15363 201 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 DNAJC21Q5F1R6 531 aaKnown RBP14.8□□□□□ -0.04
TRIM28-203ENST00000593582 CASC4Q6P4E1 433 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 CES3Q6UWW8 571 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 UNC5AQ6ZN44 842 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 ZNF605Q86T29 641 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 TMEM126BQ8IUX1 230 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 SLC22A15Q8IZD6 547 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 GSDMBQ8TAX9 411 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 ZNF501Q96CX3 271 aaPredicted RBP14.8□□□□□ -0.04
TRIM28-203ENST00000593582 PANX3Q96QZ0 392 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 KCNF1Q9H3M0 494 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 SYTL2Q9HCH5 934 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 LHX9Q9NQ69 397 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 ACTR10Q9NZ32 417 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 OR6C2Q9NZP2 312 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 SAMD15Q9P1V8 674 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 PCDHB3Q9Y5E6 796 aa14.8□□□□□ -0.04
TRIM28-203ENST00000593582 CES2O00748 559 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 KPNA5O15131 536 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 CPNE3O75131 537 aaKnown RBP14.79□□□□□ -0.04
TRIM28-203ENST00000593582 PHF2O75151 1096 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 SCRG1O75711 98 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 NTRK1P04629 796 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 MSL3P1P0C860 447 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 MLNP12872 115 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 ST6GAL1P15907 406 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 RPS3P23396 243 aaKnown RBP eCLIP14.79□□□□□ -0.044e-21■■■□□ 16.6
TRIM28-203ENST00000593582 F8A1P23610 371 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 ARNTP27540 789 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms