RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZMAT5Q9UDW3 170 aaKnown RBP4.79□□□□□ -1.64
SMAD4-216ENST00000593223 OR14J1Q9UGF5 321 aa4.79□□□□□ -1.64
SMAD4-216ENST00000593223 CHORDC1Q9UHD1 332 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-216ENST00000593223 LAMP5Q9UJQ1 280 aa4.79□□□□□ -1.64
SMAD4-216ENST00000593223 PADI1Q9ULC6 663 aa4.79□□□□□ -1.64
SMAD4-216ENST00000593223 ABT1Q9ULW3 272 aaKnown RBP4.79□□□□□ -1.64
SMAD4-216ENST00000593223 MTMR6Q9Y217 621 aa4.79□□□□□ -1.64
SMAD4-216ENST00000593223 TMEM5Q9Y2B1 443 aa4.79□□□□□ -1.64
SMAD4-216ENST00000593223 NHSQ6T4R5 1651 aa4.79□□□□□ -1.64
SMAD4-216ENST00000593223 COL18A1P39060 1754 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 AKAP12Q02952 1782 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 PDS5AQ29RF7 1337 aaKnown RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 CNTNAP2Q9UHC6 1331 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 KIAA1551Q9HCM1 1747 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 MKI67P46013 3256 aaKnown RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 LMO7Q8WWI1 1683 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 COL5A2P05997 1499 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 HS3ST1O14792 307 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 BUB3O43684 328 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TSC22D2O75157 780 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 PTP4A3O75365 173 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 SNX4O95219 450 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 CLTBP09497 229 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 LAMP2P13473 410 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 RARGP13631 454 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 UBA1P22314 1058 aaKnown RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 MAPK3P27361 379 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 KRT2P35908 639 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 PSMC4P43686 418 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TAS2R38P59533 333 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 IFI35P80217 286 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TFAP4Q01664 338 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 PPARDQ03181 441 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 SLC20A2Q08357 652 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 MAD2L1Q13257 205 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 EIF4A2Q14240 407 aaKnown RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 SNX30Q5VWJ9 437 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TOM1L2Q6ZVM7 507 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TUBA1AQ71U36 451 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 ZER1Q7Z7L7 766 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 GPR180Q86V85 440 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 RNF113BQ8IZP6 322 aaKnown RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 BEST3Q8N1M1 668 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 ZNF441Q8N8Z8 693 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 POC1AQ8NBT0 407 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 MOSPD2Q8NHP6 518 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 SPATA22Q8NHS9 363 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 SPATA20Q8TB22 786 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 DUSP19Q8WTR2 217 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 USP6NLQ92738 828 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 CFAP36Q96G28 342 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 C1orf74Q96LT6 269 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TUBA1CQ9BQE3 449 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 FTOQ9C0B1 505 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 DNAI2Q9GZS0 605 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 NT5C3AQ9H0P0 336 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 MUC13Q9H3R2 512 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 RABEP2Q9H5N1 569 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 SYNCQ9H7C4 482 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 KAT14Q9H8E8 782 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 ERVMER34-1Q9H9K5 563 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 EIF2B3Q9NR50 452 aaKnown RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 ZNF624Q9P2J8 865 aaPredicted RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 ADD3Q9UEY8 706 aaKnown RBP4.78□□□□□ -1.64
SMAD4-216ENST00000593223 RPS6KA6Q9UK32 745 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 POU2F3Q9UKI9 436 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 CFAP45Q9UL16 551 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TRAF3IP3Q9Y228 551 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 KLHL20Q9Y2M5 609 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 TRIM17Q9Y577 477 aa4.78□□□□□ -1.64
SMAD4-216ENST00000593223 SBF1O95248 1867 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 IQGAP3Q86VI3 1631 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 THSD7BQ9C0I4 1608 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 A0A0B4J203 849 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 A0A1B0GUV1 79 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 MYO1GB0I1T2 1018 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 H0YC42 278 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 M0QZ24 198 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ZBTB43O43298 467 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 TXNL1O43396 289 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ZBTB14O43829 449 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 KLHL41O60662 606 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 E2F6O75461 281 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 SLU7O95391 586 aaKnown RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 OPN1MWP04001 364 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 OPN1MW2P0DN77 364 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 OPN1MW3P0DN78 364 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ACADMP11310 421 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 TMEM11P17152 192 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 CDH2P19022 906 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 S1PR1P21453 382 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 CORO1AP31146 461 aaKnown RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 BRWD1-AS2P59051 145 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 KRTAP10-9P60411 292 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 POLR2FP61218 127 aaKnown RBP4.77□□□□□ -1.65
SMAD4-216ENST00000593223 PRAMEP78395 509 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 LRMPQ12912 555 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ZBTB17Q13105 803 aa4.77□□□□□ -1.65
SMAD4-216ENST00000593223 ADIPOQQ15848 244 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms