RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 C2P06681 752 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 PYGBP11216 843 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 CDK4P11802 303 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 KRT15P19012 456 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 PPARGP37231 505 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-220ENST00000593008 RPIAP49247 311 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 DUSP3P51452 185 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-220ENST00000593008 E2F1Q01094 437 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 POU4F1Q01851 419 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 DMPKQ09013 629 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 ILF3Q12906 894 aaKnown RBP eCLIP9.41□□□□□ -0.9
DDX39A-220ENST00000593008 CSHL1Q14406 222 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 OR4D1Q15615 310 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 FBXO48Q5FWF7 155 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 METRNLQ641Q3 311 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 C16orf46Q6P387 395 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 LRIG3Q6UXM1 1119 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 SH2D5Q6ZV89 423 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 RAPH1Q70E73 1250 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 TDRPQ86YL5 185 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 SLC22A15Q8IZD6 547 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 NAGSQ8N159 534 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 ARL10Q8N8L6 244 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 PHC3Q8NDX5 983 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 OR5AR1Q8NGP9 310 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 SLC37A2Q8TED4 501 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 SKA2Q8WVK7 121 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-220ENST00000593008 INPP5DQ92835 1189 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 GLMNQ92990 594 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 PTERQ96BW5 349 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 IL17FQ96PD4 163 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 PANX3Q96QZ0 392 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 HGH1Q9BTY7 390 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 DPEP2Q9H4A9 486 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 GPAMQ9HCL2 828 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 ACSS2Q9NR19 701 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 TRNAU1APQ9NX07 287 aaKnown RBP9.41□□□□□ -0.9
DDX39A-220ENST00000593008 TAS2R13Q9NYV9 303 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 NCKIPSDQ9NZQ3 722 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF624Q9P2J8 865 aaPredicted RBP9.41□□□□□ -0.9
DDX39A-220ENST00000593008 FETUBQ9UGM5 382 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 PADI4Q9UM07 663 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 CLCA2Q9UQC9 943 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 DHRS7Q9Y394 339 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 ZFC3H1O60293 1989 aaKnown RBP9.41□□□□□ -0.9
DDX39A-220ENST00000593008 GOLGA4Q13439 2230 aaKnown RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 EME2A4GXA9 379 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 ARHGEF33A8MVX0 844 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 GPR89AB7ZAQ6 455 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 MAP2K7O14733 419 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 PFDN6O15212 129 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 NOBOXO60393 691 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CDH16O75309 829 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 KRT38O76015 456 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 MT-CO3P00414 261 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 APOA4P06727 396 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 GP1BAP07359 652 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 SNRPAP09012 282 aaKnown RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 SLC35G4P0C7Q5 338 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 GPR89BP0CG08 455 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CCDC166P0CW27 439 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 TPBGLP0DKB5 382 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CD1DP15813 335 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 STMN1P16949 149 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 ACADLP28330 430 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 TYK2P29597 1187 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 KCNC1P48547 511 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 SERPINB9P50453 376 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CYP4F3Q08477 520 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CAMK2BQ13554 666 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 LRP8Q14114 963 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 TSNQ15631 228 aaKnown RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 RPE65Q16518 533 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 PHKG1Q16816 387 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 C18orf21Q32NC0 220 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 LVRNQ6Q4G3 990 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CYHR1Q6ZMK1 362 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 HDXQ7Z353 690 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CLEC14AQ86T13 490 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 PDZD3Q86UT5 571 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 TRABD2AQ86V40 505 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 SRRM1Q8IYB3 904 aaKnown RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 Q8N9G6 341 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 KDF1Q8NAX2 398 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 ZDHHC1Q8WTX9 485 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 EXT2Q93063 718 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CCDC74AQ96AQ1 378 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 TMEM159Q96B96 161 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 NXNL1Q96CM4 212 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF514Q96K75 400 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 GPR78Q96P69 363 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CCDC3Q9BQI4 270 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CCDC77Q9BR77 488 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 GSDMCQ9BYG8 508 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 XKR8Q9H6D3 395 aa9.4□□□□□ -0.9
DDX39A-220ENST00000593008 CCDC86Q9H6F5 360 aaKnown RBP9.4□□□□□ -0.9
DDX39A-220ENST00000593008 TMBIM4Q9HC24 238 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms