RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 TEX19Q8NA77 164 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 CLIP3Q96DZ5 547 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 PPM1MQ96MI6 270 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 RANBP9Q96S59 729 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 C17orf62Q9BQA9 187 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 HGH1Q9BTY7 390 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 DHRS4Q9BTZ2 278 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 NLNQ9BYT8 704 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 CHRNA10Q9GZZ6 450 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 CHST8Q9H2A9 424 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 ACTR5Q9H9F9 607 aaPredicted RBP12.87□□□□□ -0.35
APOC1-209ENST00000592885 AKIRIN1Q9H9L7 192 aaPredicted RBP12.87□□□□□ -0.35
APOC1-209ENST00000592885 ACTR10Q9NZ32 417 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 SMARCAL1Q9NZC9 954 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 SERTAD3Q9UJW9 196 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 SNX7Q9UNH6 387 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 R3HDM2Q9Y2K5 976 aaKnown RBP12.87□□□□□ -0.35
APOC1-209ENST00000592885 PCDHGB7Q9Y5F8 929 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
APOC1-209ENST00000592885 E7EQ34 232 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 OR56A5P0C7T3 313 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 PRSS56P0CW18 603 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 CD97P48960 835 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 PGDP52209 483 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 RPS18P62269 152 aaKnown RBP12.86□□□□□ -0.35
APOC1-209ENST00000592885 OASLQ15646 514 aaKnown RBP12.86□□□□□ -0.35
APOC1-209ENST00000592885 SYTL3Q4VX76 610 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
APOC1-209ENST00000592885 FBXO38Q6PIJ6 1188 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 FAM198BQ6UWH4 519 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 NLRP9Q7RTR0 991 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 HOOK3Q86VS8 718 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
APOC1-209ENST00000592885 DNAAF3Q8N9W5 541 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 SLC38A9Q8NBW4 561 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 OR1L3Q8NH93 324 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 OR5K2Q8NHB8 316 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 ADAMTS17Q8TE56 1095 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 ELMO1Q92556 727 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 MIB2Q96AX9 1013 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 SGSM3Q96HU1 749 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 RUFY1Q96T51 708 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 TSSK1BQ9BXA7 367 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 TSGA10Q9BZW7 698 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 ACSS2Q9NR19 701 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 PCMTD2Q9NV79 361 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 OR6C2Q9NZP2 312 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 TCFL5Q9UL49 500 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 G3BP2Q9UN86 482 aaKnown RBP12.86□□□□□ -0.35
APOC1-209ENST00000592885 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 CAPN6Q9Y6Q1 641 aa12.86□□□□□ -0.35
APOC1-209ENST00000592885 SLC5A10A0PJK1 596 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 GOLGA6L6A8MZA4 724 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 C9J4A7 227 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 LIASO43766 372 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 NR1D1P20393 614 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 AGXTP21549 392 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 ACADLP28330 430 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 PPARGP37231 505 aaPredicted RBP12.85□□□□□ -0.35
APOC1-209ENST00000592885 LMAN1P49257 510 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 ACVR1Q04771 509 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 PPP1R21Q6ZMI0 780 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 ATCAYQ86WG3 371 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 SYTL1Q8IYJ3 562 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 GPR135Q8IZ08 494 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 C19orf47Q8N9M1 422 aaKnown RBP12.85□□□□□ -0.35
APOC1-209ENST00000592885 PHC3Q8NDX5 983 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 OR52K1Q8NGK4 314 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 OR13J1Q8NGT2 312 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 TCTN2Q96GX1 697 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 DESI2Q9BSY9 194 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 SLC25A23Q9BV35 468 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 TRIM55Q9BYV6 548 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 SLC7A5P2Q9GIP4 190 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 ING2Q9H160 280 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 MLXIPLQ9NP71 852 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 ASF1AQ9Y294 204 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 PRSS21Q9Y6M0 314 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 AP1M2Q9Y6Q5 423 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
APOC1-209ENST00000592885 A0A0J9YY10 115 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 CCDC162PA2VCL2 907 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 CLEC18AA5D8T8 446 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 ARGFXA6NJG6 315 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 E7EVH7 732 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 K7EM74 188 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 CEACAM4O75871 244 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 DNAJB5O75953 348 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 RPN2P04844 631 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 CHRM5P08912 532 aaPredicted RBP12.84□□□□□ -0.35
APOC1-209ENST00000592885 CD63P08962 238 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 UGT2B7P16662 529 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 ADRA1DP25100 572 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 RRADP55042 308 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 PRKG2Q13237 762 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 NCF4Q15080 339 aa12.84□□□□□ -0.35
APOC1-209ENST00000592885 DNAJC21Q5F1R6 531 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms