RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SIRPB2Q5JXA9 342 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 TSTD2Q5T7W7 516 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 RNF187Q5TA31 235 aaPredicted RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 ATP1A1-AS1Q5TC04 95 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 MROH9Q5TGP6 573 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 MRNIPQ6NTE8 343 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 OGFOD3Q6PK18 319 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 NRROSQ86YC3 692 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 UNC5BQ8IZJ1 945 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 OR56A4Q8NGH8 313 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 GDAP1Q8TB36 358 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 RDH11Q8TC12 318 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 ZNF398Q8TD17 642 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 MFSD3Q96ES6 412 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 VPS39Q96JC1 886 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 CCDC74BQ96LY2 380 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 GPR22Q99680 433 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 PAIP2Q9BPZ3 127 aaKnown RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 APOL2Q9BQE5 337 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 SIKE1Q9BRV8 207 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 C1QTNF7Q9BXJ2 289 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 SLC12A9Q9BXP2 914 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 TDRD1Q9BXT4 1180 aaKnown RBP7.7□□□□□ -1.18
VMP1-204ENST00000587259 SLC25A18Q9H1K4 315 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 SUV39H2Q9H5I1 410 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 FAM96AQ9H5X1 160 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 SMYD2Q9NRG4 433 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 PCMTD2Q9NV79 361 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.7□□□□□ -1.18
VMP1-204ENST00000587259 ANKMY1Q9P2S6 941 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 PLLPQ9Y342 182 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 B3GALT1Q9Y5Z6 326 aa7.7□□□□□ -1.18
VMP1-204ENST00000587259 TRBV23OR9-2A0A075B6M9 112 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 IGHV5-10-1A0A0J9YXX1 117 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 NKX2-8O15522 239 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 RFPL1O75677 317 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 VAPBO95292 243 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 DRD4P21917 467 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 GRK2P25098 689 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 NMBRP28336 390 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 CRABP2P29373 138 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 CSF2RBP32927 897 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 PPARGP37231 505 aaPredicted RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 MAGEA12P43365 314 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 SCNN1BP51168 640 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 SEC24CP53992 1094 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 POLE2P56282 527 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 POU4F1Q01851 419 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 ACVR1Q04771 509 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 RAD51Q06609 339 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 ASPHQ12797 758 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 EIF3IQ13347 325 aaKnown RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 TAF1AQ15573 450 aaPredicted RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 AARS2Q5JTZ9 985 aaKnown RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 ZNF470Q6ECI4 717 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 SLC30A9Q6PML9 568 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 AFTPHQ6ULP2 937 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 LIPIQ6XZB0 460 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 SH2D5Q6ZV89 423 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 GLT6D1Q7Z4J2 308 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 SDCCAG8Q86SQ7 713 aaPredicted RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 KIRREL3Q8IZU9 778 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 PGBD5Q8N414 524 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.69□□□□□ -1.18
VMP1-204ENST00000587259 ZSCAN1Q8NBB4 408 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 C2CD4AQ8NCU7 369 aaPredicted RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 NKD1Q969G9 470 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.69□□□□□ -1.18
VMP1-204ENST00000587259 THAP11Q96EK4 314 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 SMIM14Q96QK8 99 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 TUBGCP5Q96RT8 1024 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 CMKLR1Q99788 373 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 CTRCQ99895 268 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 PITPNM3Q9BZ71 974 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 ATP13A3Q9H7F0 1226 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 CARS2Q9HA77 564 aaKnown RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 SNX15Q9NRS6 342 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 IARS2Q9NSE4 1012 aaKnown RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 INTS10Q9NVR2 710 aaKnown RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 PIH1D1Q9NWS0 290 aaKnown RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 GEMIN8Q9NWZ8 242 aaKnown RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 OCIAD1Q9NX40 245 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.69□□□□□ -1.18
VMP1-204ENST00000587259 DKK3Q9UBP4 350 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 APPL1Q9UKG1 709 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 TLK1Q9UKI8 766 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 PCDHB11Q9Y5F2 797 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 DGKBQ9Y6T7 804 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 LRRK2Q5S007 2527 aa7.69□□□□□ -1.18
VMP1-204ENST00000587259 ARHGEF17Q96PE2 2063 aaPredicted RBP7.68□□□□□ -1.18
VMP1-204ENST00000587259 A0A087X1B8 175 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 CCDC189A1A4V9 331 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 TSPAN11A1L157 253 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 PRSS38A1L453 326 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 RHPN2P1A8MT19 583 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 A8MU76 341 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 GOLGA8RI6L899 631 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 K7EM74 188 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 PPM1DO15297 605 aa7.68□□□□□ -1.18
VMP1-204ENST00000587259 SNX3O60493 162 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms