RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 CASP6P55212 293 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 CDR2Q01850 454 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 TRIM25Q14258 630 aaKnown RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 ERV3-1Q14264 604 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 ANKDD1AQ495B1 522 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 MMEL1Q495T6 779 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 PTPN20Q4JDL3 420 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 NAA35Q5VZE5 725 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 AFMIDQ63HM1 303 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 RAP1GAP2Q684P5 730 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 C11orf88Q6PI97 169 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 FAM180AQ6UWF9 173 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 KIAA1324Q6UXG2 1013 aaKnown RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 CCBE1Q6UXH8 406 aaPredicted RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 SERPINA13PQ6UXR4 307 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 LRRC31Q6UY01 552 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 FAM183BPQ6ZVS7 135 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 CHST9Q7L1S5 443 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 SLC26A9Q7LBE3 791 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 TMEM110Q86TL2 294 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 TAC4Q86UU9 113 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 TBC1D21Q8IYX1 336 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 DEFB106AQ8N104 65 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 IL17RCQ8NAC3 791 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 ZNF397Q8NF99 534 aaPredicted RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 FBXO30Q8TB52 745 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 HMGB4Q8WW32 186 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 WBP2Q969T9 261 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 MUL1Q969V5 352 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 AZIN2Q96A70 460 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 C18orf8Q96DM3 657 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 RBM18Q96H35 190 aaKnown RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 BTN2A3PQ96KV6 586 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 RPRD1AQ96P16 312 aaPredicted RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 PPP1R9BQ96SB3 815 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 CPXM1Q96SM3 734 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 ZDHHC4Q9NPG8 344 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 ZNHIT6Q9NWK9 470 aaKnown RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 DNAJC28Q9NX36 388 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 C6orf203Q9P0P8 240 aaPredicted RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 KIF17Q9P2E2 1029 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 GGA2Q9UJY4 613 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 RPS6KA6Q9UK32 745 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 AJAP1Q9UKB5 411 aaPredicted RBP4.71□□□□□ -1.66
ZNF540-204ENST00000586792 ADAM21Q9UKJ8 722 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 PLA2G4CQ9UP65 541 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 SLC27A6Q9Y2P4 619 aa4.71□□□□□ -1.66
ZNF540-204ENST00000586792 A0A1B0GVM2 712 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 KCNU1A8MYU2 1149 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 H0YC42 278 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 AP3D1O14617 1153 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 APOL1O14791 398 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 AP5Z1O43299 807 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RNASEH1O60930 286 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 LRP3O75074 770 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 NDUFS2O75306 463 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 ZNF217O75362 1048 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 LUC7L3O95232 432 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 SLU7O95391 586 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 F9P00740 461 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 IGLV3-27P01718 113 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RETP07949 1114 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 TPM1P09493 284 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RAP2AP10114 183 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 TDGF1P13385 188 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 ZNF18P17022 549 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 HOXD9P28356 352 aaPredicted RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 SDC4P31431 198 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RDXP35241 583 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 MATKP42679 507 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RPL34P49207 117 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 DHPSP49366 369 aaPredicted RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 SLC16A1P53985 500 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 NOMO3P69849 1222 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 CREB5Q02930 508 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 PPARDQ03181 441 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 DEUP1Q05D60 604 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 DMWDQ09019 674 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 SRSF5Q13243 272 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 PMS2P11Q13670 270 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 OASLQ15646 514 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 CDO1Q16878 200 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 TIGD6Q17RP2 521 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 MPEG1Q2M385 716 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 AASDHQ4L235 1098 aaPredicted RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 TDRD12Q587J7 1177 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 MS4A13Q5J8X5 152 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 MPP7Q5T2T1 576 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 EMC10Q5UCC4 262 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 SYPL2Q5VXT5 272 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RAB12Q6IQ22 244 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RPUSD3Q6P087 351 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 DNAJC24Q6P3W2 148 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 RFWD3Q6PCD5 774 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 SLC36A4Q6YBV0 504 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 LPCAT2Q7L5N7 544 aa4.7□□□□□ -1.66
ZNF540-204ENST00000586792 YTHDF3Q7Z739 585 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 PRPF39Q86UA1 669 aaKnown RBP4.7□□□□□ -1.66
ZNF540-204ENST00000586792 VPS36Q86VN1 386 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms