RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 NDUFS1P28331 727 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 CCR7P32248 378 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 CD151P48509 253 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 VPS41P49754 854 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 DNASE1L3Q13609 305 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 ITIH4Q14624 930 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 TTC27Q6P3X3 843 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 AFTPHQ6ULP2 937 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 PACS1Q6VY07 963 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 UNC5AQ6ZN44 842 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 GSTA5Q7RTV2 222 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 AMIGO1Q86WK6 493 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 C2orf73Q8N5S3 287 aaPredicted RBP11.53□□□□□ -0.56
LITAF-219ENST00000576334 OR1L3Q8NH93 324 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 TRAPPC9Q96Q05 1148 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 CD180Q99467 661 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 TFB2MQ9H5Q4 396 aaKnown RBP11.53□□□□□ -0.56
LITAF-219ENST00000576334 FAM60AQ9NP50 221 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 SYBUQ9NX95 663 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 ACTR10Q9NZ32 417 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 PADI1Q9ULC6 663 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 CDYLQ9Y232 598 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 ASF1AQ9Y294 204 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 DRG1Q9Y295 367 aaKnown RBP11.53□□□□□ -0.56
LITAF-219ENST00000576334 HEBP2Q9Y5Z4 205 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 COL12A1Q99715 3063 aa11.53□□□□□ -0.56
LITAF-219ENST00000576334 RELNP78509 3460 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 CDC14CA4D256 554 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TMEM150CB9EJG8 249 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 LIN7AO14910 233 aaPredicted RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 AVILO75366 819 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 SCRG1O75711 98 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 CCNYL3P0C7X3 344 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 PEBP1P30086 187 aaKnown RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 CCR10P46092 362 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TUBB4BP68371 445 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 PRAMEP78395 509 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 ACY1Q03154 408 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 PRKAA1Q13131 559 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 RPA4Q13156 261 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 KCNAB2Q13303 367 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TUBB2AQ13885 445 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 ZIC1Q15915 447 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 DEFB110Q30KQ9 67 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 SYTL3Q4VX76 610 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 ZNF789Q5FWF6 425 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 ANKRD22Q5VYY1 191 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 DRICH1Q6PGQ1 229 aaPredicted RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 ZNF662Q6ZS27 426 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 CDHR3Q6ZTQ4 885 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 KMT5CQ86Y97 462 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TMEM126BQ8IUX1 230 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TMEM151BQ8IW70 566 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 MPP5Q8N3R9 675 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 PPHLN1Q8NEY8 458 aaKnown RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 CFAP61Q8NHU2 1237 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 FLVCR1-AS1Q8TAF5 88 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 MFSD3Q96ES6 412 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 AP1M1Q9BXS5 423 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 FAM117AQ9C073 453 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 SLC25A18Q9H1K4 315 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 ACTL8Q9H568 366 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 MVB12BQ9H7P6 319 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 VPS37BQ9H9H4 285 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 C1GALT1Q9NS00 363 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 KCND1Q9NSA2 647 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TREX1Q9NSU2 369 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 IL1RAPL1Q9NZN1 696 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TSR3Q9UJK0 312 aaKnown RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 RUVBL2Q9Y230 463 aaKnown RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 BTRCQ9Y297 605 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 KLHL20Q9Y2M5 609 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 KCNMB2Q9Y691 235 aa11.52□□□□□ -0.57
LITAF-219ENST00000576334 TNRC6AQ8NDV7 1962 aaKnown RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 SETXQ7Z333 2677 aaKnown RBP11.52□□□□□ -0.57
LITAF-219ENST00000576334 PCSK5Q92824 1860 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 PIPSLA2A3N6 862 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 CD3EAPO15446 510 aaKnown RBP11.51□□□□□ -0.57
LITAF-219ENST00000576334 CREG1O75629 220 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 DNAJB5O75953 348 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 GAS8O95995 478 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 FTH1P02794 183 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 OR56A5P0C7T3 313 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 UGT2B7P16662 529 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 ARNTP27540 789 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 FOXL2P58012 376 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 IL10RAQ13651 578 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 LAMB3Q13751 1172 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 FASTKD1Q53R41 847 aaKnown RBP11.51□□□□□ -0.57
LITAF-219ENST00000576334 PCID2Q5JVF3 399 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 PLEKHS1Q5SXH7 462 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 TRIM58Q8NG06 486 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 MR1Q95460 341 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 FAM136AQ96C01 138 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 ABHD17AQ96GS6 310 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 IL17FQ96PD4 163 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 OR2A14Q96R47 310 aa11.51□□□□□ -0.57
LITAF-219ENST00000576334 PITPNM3Q9BZ71 974 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms