RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SEC14L1Q92503 715 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 TFGQ92734 400 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-216ENST00000575599 ZDHHC12Q96GR4 267 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 FMO2Q99518 471 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 SLC39A1Q9NY26 324 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 ASF1AQ9Y294 204 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 SLC5A10A0PJK1 596 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 OR6C74A6NCV1 312 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 PFDN6O15212 129 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 NVLO15381 856 aaKnown RBP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 KLK10O43240 276 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 USP1O94782 785 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 ANKRD34CP0C6C1 535 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 OGNP20774 298 aaKnown RBP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 RPS3P23396 243 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 IVDP26440 423 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 FMO4P31512 558 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 DHX9Q08211 1270 aaKnown RBP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 PRKG2Q13237 762 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 TMED2Q15363 201 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 TRADDQ15628 312 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 TYSND1Q2T9J0 566 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 BBS9Q3SYG4 887 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 DNAJC21Q5F1R6 531 aaKnown RBP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 CTSL3PQ5NE16 218 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 RNF187Q5TA31 235 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 ANKS6Q68DC2 871 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 ZNF470Q6ECI4 717 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 HIBCHQ6NVY1 386 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 NEPROQ6NW34 567 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 ARMC6Q6NXE6 501 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 TMEM135Q86UB9 458 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 LRRC6Q86X45 466 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 OR52E1Q8NGJ3 308 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 OR5AR1Q8NGP9 310 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 ZFPM2Q8WW38 1151 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 LCN9Q8WX39 176 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 LPGAT1Q92604 370 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 SIGLEC10Q96LC7 697 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 PANX3Q96QZ0 392 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 TAAR9Q96RI9 348 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 NRTNQ99748 197 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 CTRCQ99895 268 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 P2RY12Q9H244 342 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 SRMSQ9H3Y6 488 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 MVB12BQ9H7P6 319 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 C20orf96Q9NUD7 363 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-216ENST00000575599 HRASLS2Q9NWW9 162 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 GRHL1Q9NZI5 618 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 RAB21Q9UL25 225 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 CRYL1Q9Y2S2 319 aa12.9□□□□□ -0.34
RPAIN-216ENST00000575599 KMT2BQ9UMN6 2715 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 B4E171 279 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 BHMG1C9JSJ3 638 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 APOA4P06727 396 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 PGAM1P18669 254 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 POLR2CP19387 275 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 TSPAN7P41732 249 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 ARL4CP56559 192 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 RAB15P59190 212 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 PLOD1Q02809 727 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 TLE3Q04726 772 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 FOXM1Q08050 763 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 PRKAA1Q13131 559 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 LONRF1Q17RB8 773 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 ZFAND4Q86XD8 727 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 VRK3Q8IV63 474 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 DENND6AQ8IWF6 608 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 PDIK1LQ8N165 341 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 BMPERQ8N8U9 685 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 FBXO25Q8TCJ0 367 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 FAM136AQ96C01 138 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 PWWP2AQ96N64 755 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 RAB33BQ9H082 229 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 TRIT1Q9H3H1 467 aaKnown RBP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 ZNF768Q9H5H4 540 aaKnown RBP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 XKR8Q9H6D3 395 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 EPHA6Q9UF33 1036 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 TDRKHQ9Y2W6 561 aaKnown RBP12.89□□□□□ -0.35
RPAIN-216ENST00000575599 B3GALT1Q9Y5Z6 326 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 ZFHX4Q86UP3 3567 aa12.89□□□□□ -0.35
RPAIN-216ENST00000575599 GSAPA4D1B5 854 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 TOX3O15405 576 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-216ENST00000575599 NIPSNAP2O75323 286 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 AOAHP28039 575 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 ACADLP28330 430 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 SLC1A2P43004 574 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 SH3BP2P78314 561 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 MC2RQ01718 297 aa12.88□□□□□ -0.35
RPAIN-216ENST00000575599 CLN3Q13286 438 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms