RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SDHBP21912 280 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 CCNFP41002 786 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 PGGT1BP53609 377 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 ABRQ12979 859 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 SP140Q13342 867 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 DUS1LQ6P1R4 473 aaKnown RBP16.66■□□□□ 0.26
NUP88-210ENST00000574867 TMEM207Q6UWW9 146 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 ZNF438Q7Z4V0 828 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 TBC1D1Q86TI0 1168 aaPredicted RBP16.66■□□□□ 0.26
NUP88-210ENST00000574867 DCUN1D3Q8IWE4 304 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 CABS1Q96KC9 395 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 CAMK1GQ96NX5 476 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 POLG2Q9UHN1 485 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 LGALS13Q9UHV8 139 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 TSR3Q9UJK0 312 aaKnown RBP16.66■□□□□ 0.26
NUP88-210ENST00000574867 ACOT9Q9Y305 439 aa16.66■□□□□ 0.26
NUP88-210ENST00000574867 RHPN2P1A8MT19 583 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 TNFSF14O43557 240 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 KDM1AO60341 852 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 PSIP1O75475 530 aaKnown RBP16.65■□□□□ 0.26
NUP88-210ENST00000574867 CATP04040 527 aaKnown RBP16.65■□□□□ 0.26
NUP88-210ENST00000574867 MPOP05164 745 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 C8GP07360 202 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 ACP1P24666 158 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 ZNF844Q08AG5 666 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 NR1D2Q14995 579 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 MAGEC3Q8TD91 643 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 UBXN10Q96LJ8 280 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 ZIM3Q96PE6 472 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 FERD3LQ96RJ6 166 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 DERL2Q9GZP9 239 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 KIR3DX1Q9H7L2 352 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 LRIT1Q9P2V4 623 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 RNF215Q9Y6U7 377 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 A0A096LPK6 155 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 TLDC2A0PJX2 215 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 LILRA5A6NI73 299 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 ZW10O43264 779 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 C2P06681 752 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 CASP8Q14790 479 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 TTC23LQ6PF05 361 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 CYHR1Q6ZMK1 362 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 OR5AR1Q8NGP9 310 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 CFAP61Q8NHU2 1237 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 MZB1Q8WU39 189 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 ANKRD49Q8WVL7 239 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 ASB11Q8WXH4 323 aa16.65■□□□□ 0.26
NUP88-210ENST00000574867 RUVBL2Q9Y230 463 aaKnown RBP16.65■□□□□ 0.26
NUP88-210ENST00000574867 GOLGA4Q13439 2230 aaKnown RBP16.64■□□□□ 0.25
NUP88-210ENST00000574867 PPM1DO15297 605 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 SLC16A5O15375 505 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 C1orf105O95561 183 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 GP1BAP07359 652 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 KRT15P19012 456 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 GPR3P46089 330 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 ATP6V0D1P61421 351 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 GPR18Q14330 331 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 KRT71Q3SY84 523 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 GUSBP11Q6P575 273 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 TMEM26Q6ZUK4 368 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 GLRX5Q86SX6 157 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 RASGRP3Q8IV61 690 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 FBXO15Q8NCQ5 510 aaPredicted RBP16.64■□□□□ 0.25
NUP88-210ENST00000574867 ACMSDQ8TDX5 336 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 SLC38A3Q99624 504 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 HGH1Q9BTY7 390 aa16.64■□□□□ 0.25
NUP88-210ENST00000574867 PTPRZ1P23471 2315 aaPredicted RBP16.64■□□□□ 0.25
NUP88-210ENST00000574867 GFYI3L273 518 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 TM4SF5O14894 197 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 EPHA4P54764 986 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 EFL1Q7Z2Z2 1120 aaKnown RBP16.63■□□□□ 0.25
NUP88-210ENST00000574867 ALYREFQ86V81 257 aaKnown RBP16.63■□□□□ 0.25
NUP88-210ENST00000574867 CCDC74AQ96AQ1 378 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 RUFY1Q96T51 708 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 CPED1A4D0V7 1026 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 ZBTB14O43829 449 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 RFPL1O75677 317 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 ENO2P09104 434 aaPredicted RBP16.63■□□□□ 0.25
NUP88-210ENST00000574867 LTA4HP09960 611 aaKnown RBP16.63■□□□□ 0.25
NUP88-210ENST00000574867 COL6A2P12110 1019 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 MYF5P13349 255 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 CYP2A7P20853 494 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 MAP4P27816 1152 aaKnown RBP16.63■□□□□ 0.25
NUP88-210ENST00000574867 CSHL1Q14406 222 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 PLCL1Q15111 1095 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 FAM83EQ2M2I3 478 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 CEP85LQ5SZL2 805 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 UBE2R2Q712K3 238 aaPredicted RBP16.63■□□□□ 0.25
NUP88-210ENST00000574867 ADAMTSL2Q86TH1 951 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 SPNS2Q8IVW8 549 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 PHC3Q8NDX5 983 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 DEFB124Q8NES8 71 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 IFI44Q8TCB0 444 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 RAD51AP1Q96B01 352 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 VPS11Q9H270 941 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 EPB41L1Q9H4G0 881 aa16.63■□□□□ 0.25
NUP88-210ENST00000574867 PIEZO1Q92508 2521 aa16.62■□□□□ 0.25
NUP88-210ENST00000574867 CCDC189A1A4V9 331 aa16.62■□□□□ 0.25
NUP88-210ENST00000574867 PABPN1LA6NDY0 278 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms