RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 SPTBN4Q9H254 2564 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 ZNF839A8K0R7 811 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 MATN2O00339 956 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 RASGRF2O14827 1237 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 DUX1O43812 170 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 PSIP1O75475 530 aaKnown RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 RFPL3O75679 317 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 FAM155BO75949 473 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 EML2O95834 649 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 F7P08709 466 aaPredicted RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 CYP2A7P20853 494 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 SAT1P21673 171 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 SLC19A1P41440 591 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 MAGEA12P43365 314 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 ACADVLP49748 655 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 ATP6V0D1P61421 351 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 E2F1Q01094 437 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 PLCL1Q15111 1095 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 TRIP6Q15654 476 aaKnown RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 ACSBG2Q5FVE4 666 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 MROH9Q5TGP6 573 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 KLC3Q6P597 504 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 PAQR3Q6TCH7 311 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 TIFABQ6ZNK6 161 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 TMEM26Q6ZUK4 368 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 ALYREFQ86V81 257 aaKnown RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 OR10G6Q8NH81 332 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 IFI44Q8TCB0 444 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 PATE1Q8WXA2 126 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 RAD51AP1Q96B01 352 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 MRRFQ96E11 262 aaKnown RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 TSNARE1Q96NA8 513 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 RUFY1Q96T51 708 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 INSM2Q96T92 566 aaPredicted RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 SLC38A3Q99624 504 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 SLC30A3Q99726 388 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 TMEM109Q9BVC6 243 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 DERL2Q9GZP9 239 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 SCHIP1Q9P0W5 487 aaPredicted RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 SPATA7Q9P0W8 599 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 ZNF624Q9P2J8 865 aaPredicted RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 LRIT1Q9P2V4 623 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 TLK1Q9UKI8 766 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 APOBEC2Q9Y235 224 aaKnown RBP13.22□□□□□ -0.29
NDE1-209ENST00000574109 PCM1Q15154 2024 aa13.22□□□□□ -0.29
NDE1-209ENST00000574109 TM4SF5O14894 197 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 WISP3O95389 354 aaPredicted RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 ALDOAP04075 364 aaKnown RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 MPOP05164 745 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 SLC35E2BP0CK96 405 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 COL6A2P12110 1019 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 MAP4P27816 1152 aaKnown RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 GCAP28676 217 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 TYK2P29597 1187 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 SHMT2P34897 504 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 HSD17B2P37059 387 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 AP1S2P56377 157 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 TIAL1Q01085 375 aaKnown RBP eCLIP13.21□□□□□ -0.29
NDE1-209ENST00000574109 BMPR2Q13873 1038 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 GPR18Q14330 331 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 RSPO4Q2I0M5 234 aaPredicted RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 FAM83EQ2M2I3 478 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 TSNAXIP1Q2TAA8 658 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 BEND6Q5SZJ8 279 aaPredicted RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 GUSBP11Q6P575 273 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 LRIG3Q6UXM1 1119 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 EFL1Q7Z2Z2 1120 aaKnown RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 SPRED1Q7Z699 444 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 VRK3Q8IV63 474 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 DEFB124Q8NES8 71 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 CCDC74AQ96AQ1 378 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 HGH1Q9BTY7 390 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 TRIM54Q9BYV2 358 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 TFB2MQ9H5Q4 396 aaKnown RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 CAAP1Q9H8G2 361 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 KCNK4Q9NYG8 393 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 LGALS13Q9UHV8 139 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 NOVA2Q9UNW9 492 aaKnown RBP13.21□□□□□ -0.29
NDE1-209ENST00000574109 PLAAQ9Y263 795 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 ACOT9Q9Y305 439 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 RNF215Q9Y6U7 377 aa13.21□□□□□ -0.29
NDE1-209ENST00000574109 TRIM49D1C9J1S8 452 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 GFYI3L273 518 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 ZBTB14O43829 449 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 C1orf105O95561 183 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 TSPAN12O95859 305 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 SHBGP04278 402 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 LTA4HP09960 611 aaKnown RBP13.2□□□□□ -0.3
NDE1-209ENST00000574109 H2AFXP16104 143 aaPredicted RBP13.2□□□□□ -0.3
NDE1-209ENST00000574109 CAPZBP47756 277 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 CSRP3P50461 194 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 NOVA1P51513 510 aaKnown RBP13.2□□□□□ -0.3
NDE1-209ENST00000574109 ARHGAP19Q14CB8 494 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 OOSP2Q86WS3 158 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 CEP97Q8IW35 865 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 MCOLN3Q8TDD5 553 aa13.2□□□□□ -0.3
NDE1-209ENST00000574109 EEF1AKMT1Q8WVE0 214 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms