RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TRMT13Q9NUP7 481 aaKnown RBP18.69■□□□□ 0.58
SCARF1-206ENST00000573852 DCAF13Q9NV06 445 aaKnown RBP18.69■□□□□ 0.58
SCARF1-206ENST00000573852 NAALAD2Q9Y3Q0 740 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 SNX5Q9Y5X3 404 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 GLTPD2A6NH11 291 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 MAN1A2O60476 641 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 ASGR1P07306 291 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 ITIH1P19827 911 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 MSH3P20585 1137 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 CDH3P22223 829 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 CA5AP35218 305 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 SUSD1Q6UWL2 747 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 LINGO4Q6UY18 593 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 DCP2Q8IU60 420 aaKnown RBP18.69■□□□□ 0.58
SCARF1-206ENST00000573852 DENND1CQ8IV53 801 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 OR5K1Q8NHB7 308 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 CLHC1Q8NHS4 586 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 NCLNQ969V3 563 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 ITCHQ96J02 903 aa18.69■□□□□ 0.58
SCARF1-206ENST00000573852 PRMT5O14744 637 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-206ENST00000573852 RAD51BO15315 384 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 RGS14O43566 566 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 XPNPEP2O43895 674 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 ADAM23O75077 832 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 CREG1O75629 220 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 RPLP2P05387 115 aaKnown RBP18.68■□□□□ 0.58
SCARF1-206ENST00000573852 FSHRP23945 695 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 MAGEA10P43363 369 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-206ENST00000573852 KPNA1P52294 538 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-206ENST00000573852 RAD23AP54725 363 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 TOP3AQ13472 1001 aaPredicted RBP18.68■□□□□ 0.58
SCARF1-206ENST00000573852 MRPL58Q14197 206 aaKnown RBP18.68■□□□□ 0.58
SCARF1-206ENST00000573852 ANKRD13BQ86YJ7 626 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 ADHFE1Q8IWW8 467 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 EID3Q8N140 333 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 CNIH3Q8TBE1 160 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 NETO1Q8TDF5 533 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 GPR62Q9BZJ7 368 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 CIPCQ9C0C6 399 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 KAT8Q9H7Z6 458 aaKnown RBP18.68■□□□□ 0.58
SCARF1-206ENST00000573852 IL17CQ9P0M4 197 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 KLQ9UEF7 1012 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 C3orf18Q9UK00 162 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 TMEM221A6NGB7 291 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 ARVCFO00192 962 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 SYN3O14994 580 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 AREL1O15033 823 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 UGT2B11O75310 529 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 E2F6O75461 281 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 RHOCP08134 193 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 DUSP4Q13115 394 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 FKBP9P1Q75LS8 142 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 GPR149Q86SP6 731 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 PARP8Q8N3A8 854 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 OR52E4Q8NGH9 312 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 LKAAEAR1Q8TD35 194 aa18.68■□□□□ 0.58
SCARF1-206ENST00000573852 NDUFS2O75306 463 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 GJB5O95377 273 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CD160O95971 181 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 GLUD1P00367 558 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 SERPINA1P01009 418 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CYBAP13498 195 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 NRIP1P48552 1158 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CACNG1Q06432 222 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 C17orf99Q6UX52 265 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CHPFQ8IZ52 775 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 STK40Q8N2I9 435 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 C2orf69Q8N8R5 385 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 LINC01599Q8WXQ3 324 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 OR52E6Q96RD3 313 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 BOCQ9BWV1 1114 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CLMPQ9H6B4 373 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 TRBV5-3A0A0A0MS03 114 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 ILVBLA1L0T0 632 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CLDN25C9JDP6 229 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 TOR1BO14657 336 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 MITFO75030 526 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 SEC22BO75396 215 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 IL6P05231 212 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CTGFP29279 349 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 FKBP1BP68106 108 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 PHC1P78364 1004 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 EMX1Q04741 257 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 TRIM32Q13049 653 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CDK5R2Q13319 367 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 PHKG1Q16816 387 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 PTRHD1Q6GMV3 140 aaKnown RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 C16orf59Q7L2K0 433 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 DET1Q7L5Y6 550 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 ZCCHC7Q8N3Z6 543 aaKnown RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 FAR1Q8WVX9 515 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 SPATA17Q96L03 361 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 APOL5Q9BWW9 433 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 SPC25Q9HBM1 224 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 VNN3Q9NY84 501 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 ZNF490Q9ULM2 529 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 PAIP2BQ9ULR5 123 aaKnown RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 PCDHB14Q9Y5E9 798 aa18.67■□□□□ 0.58
SCARF1-206ENST00000573852 ZNF99A8MXY4 864 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-206ENST00000573852 CLDN11O75508 207 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms