RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FER1L5A0AVI2 2057 aa16.9■□□□□ 0.3
SMG6-214ENST00000573827 QSOX1O00391 747 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 GPC4O75487 556 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 FTH1P02794 183 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 NTRK1P04629 796 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 CCR7P32248 378 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 MAGEA6P43360 314 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 CRADDP78560 199 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 NFKB2Q00653 900 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 ABRQ12979 859 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 GPS2Q13227 327 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 DNASE1L3Q13609 305 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 PCID2Q5JVF3 399 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 PRAMEF17Q5VTA0 474 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 LYPLAL1Q5VWZ2 237 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 LDB1Q86U70 411 aaPredicted RBP16.89■□□□□ 0.29
SMG6-214ENST00000573827 VRK3Q8IV63 474 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 OR8K5Q8NH50 307 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 TRAPPC9Q96Q05 1148 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 MENTQ9BUN1 341 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 SLC25A18Q9H1K4 315 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 KCND1Q9NSA2 647 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 MED13Q9UHV7 2174 aa16.89■□□□□ 0.29
SMG6-214ENST00000573827 H3BMH7 237 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 J3QKU1 62 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 CEP104O60308 925 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 RECKO95980 971 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 MT-ND3P03897 115 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 OR56A5P0C7T3 313 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 SFTPCP11686 197 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 PVRP15151 417 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 TCN2P20062 427 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 RORAP35398 523 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 CCR10P46092 362 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 GABRA4P48169 554 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 LMAN1P49257 510 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 SESN2P58004 480 aaPredicted RBP16.88■□□□□ 0.29
SMG6-214ENST00000573827 MC1RQ01726 317 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 KCNAB2Q13303 367 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 GRB7Q14451 532 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 KRT33BQ14525 404 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 ZIC1Q15915 447 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 TTC27Q6P3X3 843 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 CYB5D1Q6P9G0 228 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 FAM199XQ6PEV8 388 aaPredicted RBP16.88■□□□□ 0.29
SMG6-214ENST00000573827 UNC5AQ6ZN44 842 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 TBC1D21Q8IYX1 336 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 SLC22A15Q8IZD6 547 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 RASGEF1CQ8N431 466 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 OR1L3Q8NH93 324 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 OR5K2Q8NHB8 316 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 LRFN5Q96NI6 719 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 KIFC1Q9BW19 673 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 P2RY12Q9H244 342 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 SPHK1Q9NYA1 384 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 ACTR10Q9NZ32 417 aa16.88■□□□□ 0.29
SMG6-214ENST00000573827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.87■□□□□ 0.29
SMG6-214ENST00000573827 GSAPA4D1B5 854 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 IQCF5A8MTL0 148 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 C21orf140B9A014 251 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 SUV39H1O43463 412 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 HCRTR1O43613 425 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 GAS8O95995 478 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 TPSB2P20231 275 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 CDH3P22223 829 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 NMBRP28336 390 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 PEBP1P30086 187 aaKnown RBP16.87■□□□□ 0.29
SMG6-214ENST00000573827 ARL4DP49703 201 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 PRKAA1Q13131 559 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 KCNJ11Q14654 390 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 BRD3Q15059 726 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 TPSAB1Q15661 275 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 DEFB109BQ30KR1 87 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 PLEKHS1Q5SXH7 462 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 LCN10Q6JVE6 187 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 SPESP1Q6UW49 350 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 C4orf22Q6V702 233 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 TMEM135Q86UB9 458 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 PPHLN1Q8NEY8 458 aaKnown RBP16.87■□□□□ 0.29
SMG6-214ENST00000573827 MAIP1Q8WWC4 291 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMG6-214ENST00000573827 OR2A14Q96R47 310 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 CARD6Q9BX69 1037 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 AP1M1Q9BXS5 423 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 IL22Q9GZX6 179 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 KCND3Q9UK17 655 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 ASF1AQ9Y294 204 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 NEU2Q9Y3R4 380 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 PCDHB3Q9Y5E6 796 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 KCNMB2Q9Y691 235 aa16.87■□□□□ 0.29
SMG6-214ENST00000573827 MAST4O15021 2626 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 C2orf74A8MZ97 194 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 CPNE3O75131 537 aaKnown RBP16.86■□□□□ 0.29
SMG6-214ENST00000573827 CREG1O75629 220 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 SCRG1O75711 98 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 CAPN1P07384 714 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 CCNYL3P0C7X3 344 aa16.86■□□□□ 0.29
SMG6-214ENST00000573827 UGT2B7P16662 529 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms