RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ZNF691Q5VV52 312 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 SBSNQ6UWP8 590 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 CCDC81Q6ZN84 652 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 ADHFE1Q8IWW8 467 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 ARL10Q8N8L6 244 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 NETO1Q8TDF5 533 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 GLMNQ92990 594 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 SEPT5Q99719 369 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 USE1Q9NZ43 259 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 ERVK-18Q9QC07 812 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 KLQ9UEF7 1012 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 EIF3LQ9Y262 564 aaKnown RBP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 ANKRD66B4E2M5 251 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 TLR5O60602 858 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 CREG1O75629 220 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 OTCP00480 354 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 MSH3P20585 1137 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 VBP1P61758 197 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 PCBP2Q15366 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 FAR1Q8WVX9 515 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 MTFMTQ96DP5 389 aaKnown RBP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 ABHD8Q96I13 439 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 FUBP3Q96I24 572 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 PPP3R2Q96LZ3 170 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 TMEFF2Q9UIK5 374 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 AGO1Q9UL18 857 aaKnown RBP17.13■□□□□ 0.33
SCARF1-205ENST00000571272 CCL27Q9Y4X3 112 aa17.13■□□□□ 0.33
SCARF1-205ENST00000571272 M0R3G1 203 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 IFRD1O00458 451 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 BCKDKO14874 412 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 SEC22BO75396 215 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 OAZ2O95190 189 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 ANGPTL1O95841 491 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 IGLV3-27P01718 113 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 DNASE1L3Q13609 305 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 DSC3Q14574 896 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 ADPRMQ3LIE5 342 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 PAGE2BQ5JRK9 111 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 VARS2Q5ST30 1063 aaKnown RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 OR5K1Q8NHB7 308 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 OR52E6Q96RD3 313 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 BARD1Q99728 777 aaKnown RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 EGFL8Q99944 293 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 ALOXE3Q9BYJ1 711 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 ELOVL2Q9NXB9 296 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 ANGPTL3Q9Y5C1 460 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 MOXD2PA6NHM9 499 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 NADKO95544 446 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 B3GALT4O96024 378 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 S100BP04271 92 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 CTXN3Q4LDR2 81 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 ANKRD46Q86W74 232 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 MICU2Q8IYU8 434 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 RHNO1Q9BSD3 238 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 MROQ9BYG7 248 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 CRISPLD1Q9H336 500 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 AKIP1Q9NQ31 210 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 OLA1Q9NTK5 396 aaKnown RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 DCAF13Q9NV06 445 aaKnown RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 VNN3Q9NY84 501 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 Q9Y3F1 56 aa17.12■□□□□ 0.33
SCARF1-205ENST00000571272 TNPO3Q9Y5L0 923 aaKnown RBP17.12■□□□□ 0.33
SCARF1-205ENST00000571272 ZBBXA8MT70 800 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 SCELO95171 688 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 PRAMEF12O95522 483 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 MYCLP1P12525 358 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-205ENST00000571272 TMED10P49755 219 aaKnown RBP17.11■□□□□ 0.33
SCARF1-205ENST00000571272 FPGSQ05932 587 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 TOP3AQ13472 1001 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-205ENST00000571272 TMEM236Q5W0B7 351 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 SUSD1Q6UWL2 747 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 LINGO4Q6UY18 593 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 RORBQ92753 470 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 MAGEH1Q9H213 219 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 ORC6Q9Y5N6 252 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 TRPM7Q96QT4 1865 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 PRMT5O14744 637 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-205ENST00000571272 TAPBPO15533 448 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 ESR1P03372 595 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 UGT2B4P06133 528 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 CR2P20023 1033 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 RUNDC3AQ59EK9 446 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 CIPCQ9C0C6 399 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 RIBC2Q9H4K1 309 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 SACM1LQ9NTJ5 587 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 ATAD3AQ9NVI7 634 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 PCDHB14Q9Y5E9 798 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 RGS14O43566 566 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 JRKO75564 520 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 PTGER3P43115 390 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 CLCN4P51793 760 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 PGS1Q32NB8 556 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 SPRYD7Q5W111 196 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 CES5AQ6NT32 575 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 LRRC8DQ7L1W4 858 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 ADAMTSL2Q86TH1 951 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 ATP13A3Q9H7F0 1226 aa17.11■□□□□ 0.33
SCARF1-205ENST00000571272 KAT8Q9H7Z6 458 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms