RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 RHBDF2Q6PJF5 856 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 MOXD1Q6UVY6 613 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 C17orf99Q6UX52 265 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 TOM1L2Q6ZVM7 507 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 SERPINA11Q86U17 422 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 EGFL6Q8IUX8 553 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 FBXW8Q8N3Y1 598 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 SLC4A11Q8NBS3 891 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 TSPAN14Q8NG11 270 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 TMEM18Q96B42 140 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 ARHGEF26Q96DR7 871 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 FRG2BQ96QU4 278 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 OR2A14Q96R47 310 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 KCNK16Q96T55 309 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 HNRNPABQ99729 332 aaKnown RBP4.61□□□□□ -1.67
CHD9-220ENST00000569794 H2AFJQ9BTM1 129 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 HDHD5Q9BXW7 423 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 GFRA4Q9GZZ7 299 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.61□□□□□ -1.67
CHD9-220ENST00000569794 SYTL2Q9HCH5 934 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 ERAP1Q9NZ08 941 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 TMOD2Q9NZR1 351 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 COX16Q9P0S2 106 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 KIAA1456Q9P272 454 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 PTBP2Q9UKA9 531 aaKnown RBP4.61□□□□□ -1.67
CHD9-220ENST00000569794 FBXW2Q9UKT8 454 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 TDRKHQ9Y2W6 561 aaKnown RBP4.61□□□□□ -1.67
CHD9-220ENST00000569794 CMAHPQ9Y471 501 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 ACEP12821 1306 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 MST1RQ04912 1400 aa4.61□□□□□ -1.67
CHD9-220ENST00000569794 A0A0B4J203 849 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 SLC9B1P1A6NJY1 282 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 USP17L23D6RBM5 183 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 H3BQ06 376 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 IFNL4K9M1U5 179 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 RASGRF2O14827 1237 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 STRNO43815 780 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 CELF2O95319 508 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 SIX3O95343 332 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 DIRAS3O95661 229 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 TBX6O95947 436 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 APOHP02749 345 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 CYC1P08574 325 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 HSPA5P11021 654 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 ETS1P14921 441 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 ITIH1P19827 911 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 ACHEP22303 614 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 CCNCP24863 283 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 GSTM2P28161 218 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 GDI1P31150 447 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 HOXA13P31271 388 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 FASLGP48023 281 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 ADARP55265 1226 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 TRA2BP62995 288 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 ST3GAL1Q11201 340 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 PPIGQ13427 754 aaKnown RBP eCLIP4.6□□□□□ -1.67
CHD9-220ENST00000569794 CUL2Q13617 745 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 TRADDQ15628 312 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 COL28A1Q2UY09 1125 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 EDRF1Q3B7T1 1238 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 FBXO43Q4G163 708 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 XKR9Q5GH70 373 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 MDH1BQ5I0G3 518 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 CES4AQ5XG92 561 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 FAM91A1Q658Y4 838 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 ARHGAP11AQ6P4F7 1023 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 FIP1L1Q6UN15 594 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 RBM43Q6ZSC3 357 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 MOB3CQ70IA8 216 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 RUFY3Q7L099 469 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 RNF144BQ7Z419 303 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 PATL1Q86TB9 770 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 UNC5CLQ8IV45 518 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 KLHDC8BQ8IXV7 354 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 PGBD5Q8N414 524 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 GUF1Q8N442 669 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 WDSUB1Q8N9V3 476 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 OR7G3Q8NG95 312 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 GRAPLQ8TC17 118 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 KIAA1524Q8TCG1 905 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 RNF139Q8WU17 664 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 PTPMT1Q8WUK0 201 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 SECTM1Q8WVN6 248 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 FAR1Q8WVX9 515 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 ZNF75CPQ92670 426 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 THRSPQ92748 146 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 LRRC59Q96AG4 307 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 RAB7BQ96AH8 199 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 C1QTNF1Q9BXJ1 281 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 NUF2Q9BZD4 464 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 GLIS2Q9BZE0 524 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 ACPTQ9BZG2 426 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 NCOR1P1Q9H4R4 102 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 CNOT10Q9H9A5 744 aaKnown RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 SCRT2Q9NQ03 307 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 ATAD3AQ9NVI7 634 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 HMG20BQ9P0W2 317 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 CRNNQ9UBG3 495 aaPredicted RBP4.6□□□□□ -1.67
CHD9-220ENST00000569794 HDAC6Q9UBN7 1215 aa4.6□□□□□ -1.67
CHD9-220ENST00000569794 SPASTQ9UBP0 616 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms