RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ANKS6Q68DC2 871 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 HIBCHQ6NVY1 386 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 CENPUQ71F23 418 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 OTOAQ7RTW8 1153 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 ZFAND4Q86XD8 727 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 PDIK1LQ8N165 341 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 OR5AR1Q8NGP9 310 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 OR5K2Q8NHB8 316 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 CALML6Q8TD86 181 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 PMEPA1Q969W9 287 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 SNF8Q96H20 258 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 MAP3K3Q99759 626 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 EBNA1BP2Q99848 306 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 HGH1Q9BTY7 390 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 C20orf96Q9NUD7 363 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 SIDT1Q9NXL6 827 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 CRYL1Q9Y2S2 319 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 PCDHB11Q9Y5F2 797 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 FAM208BQ5VWN6 2430 aa13.43□□□□□ -0.26
HERPUD1-218ENST00000569569 CFAP47Q6ZTR5 3102 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 IGHV5-51A0A0C4DH38 117 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 TLCD2A6NGC4 264 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 STMND1H3BQB6 276 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 NDC80O14777 642 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 KDM1AO60341 852 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 SEC31AO94979 1220 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 S1PR4O95977 384 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 NELFEP18615 380 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 ITGA8P53708 1063 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 FOXM1Q08050 763 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 CTBP1Q13363 440 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 BBS9Q3SYG4 887 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 MSS51Q4VC12 460 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 PLEKHS1Q5SXH7 462 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 ZNF470Q6ECI4 717 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 CYB5D1Q6P9G0 228 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 MAATS1Q7Z4T9 603 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 AMIGO1Q86WK6 493 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 DTX1Q86Y01 620 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 KMT5CQ86Y97 462 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 VRK3Q8IV63 474 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 CARFQ8N187 725 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 GABPB2Q8TAK5 448 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 GSDMBQ8TAX9 411 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 SLC41A2Q96JW4 573 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 TRIM31Q9BZY9 425 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 APMAPQ9HDC9 416 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 LATS2Q9NRM7 1088 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 LHX6Q9UPM6 363 aa13.42□□□□□ -0.26
HERPUD1-218ENST00000569569 GSAPA4D1B5 854 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 FAM187AA6NFU0 413 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 BTN3A3O00478 584 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 BTN3A1O00481 513 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 BANF1O75531 89 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 RPN2P04844 631 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 PKMP14618 531 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 CHRM3P20309 590 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 SHMT2P34897 504 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 KPNA2P52292 529 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 TMPRSS3P57727 454 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 SH3BP2P78314 561 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 ABRQ12979 859 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 IL11RAQ14626 422 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 CRYMQ14894 314 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 TGIF1Q15583 401 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 HSP90AA5PQ58FG0 334 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 ZNF789Q5FWF6 425 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 SPANXN3Q5MJ09 141 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 UNC5DQ6UXZ4 953 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 KCNMB4Q86W47 210 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 DENND6AQ8IWF6 608 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 SIDT2Q8NBJ9 832 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 BBOF1Q8ND07 529 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 LRRC39Q96DD0 335 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 CTRCQ99895 268 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 XKR8Q9H6D3 395 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 FBXO5Q9UKT4 447 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 TDRKHQ9Y2W6 561 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 SNX24Q9Y343 169 aa13.41□□□□□ -0.26
HERPUD1-218ENST00000569569 CHD6Q8TD26 2715 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 C2orf74A8MZ97 194 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 E5RI56 91 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 NIPSNAP2O75323 286 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 ZBTB11O95625 1053 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 CDH3P22223 829 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 ELK3P41970 407 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 SLC1A2P43004 574 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 RPL21P46778 160 aaKnown RBP13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 ARL4DP49703 201 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 ARL4CP56559 192 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 HSD11B2P80365 405 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 C2orf54Q08AI8 447 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 HIF1AQ16665 826 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 UNC5AQ6ZN44 842 aa13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 BPHLQ86WA6 291 aaPredicted RBP13.4□□□□□ -0.26
HERPUD1-218ENST00000569569 IGDCC3Q8IVU1 814 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms