RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 HOXC6P09630 235 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 RPIAP49247 311 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 BMXP51813 675 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 FKBP1AP62942 108 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 DEFA5Q01523 94 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PIGGQ5H8A4 983 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 TXNDC5Q8NBS9 432 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PIGKQ92643 395 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZNF641Q96N77 438 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 NIFKQ9BYG3 293 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 TFB2MQ9H5Q4 396 aaKnown RBP12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 DNAJC11Q9NVH1 559 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 PCDHGB3Q9Y5G1 929 aa12.2□□□□□ -0.46
CSPG4P13-202ENST00000567704 H0YJX3 145 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ALDH1A2O94788 518 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 HUNKP57058 714 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ARHGEF6Q15052 776 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZBTB6Q15916 424 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 BTBD16Q32M84 506 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 RNF44Q7L0R7 432 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 TAC4Q86UU9 113 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 PIM3Q86V86 326 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ABHD11Q8NFV4 315 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SPPL2BQ8TCT7 592 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 CSGALNACT1Q8TDX6 532 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 LGALS12Q96DT0 336 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC9A7Q96T83 725 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC29A1Q99808 456 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 PDZD7Q9H5P4 517 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZDHHC7Q9NXF8 308 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 KRBA1A5PL33 1030 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 YJEFN3A6XGL0 299 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SNNO75324 88 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 CHRNA1P02708 482 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 BRCC3P46736 316 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 PGGT1BP53609 377 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 CDKL1Q00532 357 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC10A6Q3KNW5 377 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SYPL2Q5VXT5 272 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 TPGS1Q6ZTW0 290 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 NUDT18Q6ZVK8 323 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC15A3Q8IY34 581 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 LSM14AQ8ND56 463 aaKnown RBP12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 MAGEB10Q96LZ2 347 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 KCNK13Q9HB14 408 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 TBC1D24Q9ULP9 559 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 PCDHB1Q9Y5F3 818 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SMIM30A4D0T7 59 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 KPNA6O60684 536 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 CSTF2P33240 577 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 RPL4P36578 427 aaKnown RBP12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 DGKEP52429 567 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 DIO3P55073 304 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 POLR2LP62875 67 aaKnown RBP12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 PPP2R2BQ00005 443 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZNF45Q02386 682 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 CTC1Q2NKJ3 1217 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 FBXO43Q4G163 708 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 DCDC5Q6ZRR9 648 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 AMIGO1Q86WK6 493 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 OOSP2Q86WS3 158 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC39A8Q9C0K1 460 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ANKHQ9HCJ1 492 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZIM2Q9NZV7 527 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 ERVK-18Q9QC07 812 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 GULP1Q9UBP9 304 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 FBXW11Q9UKB1 542 aa12.19□□□□□ -0.46
CSPG4P13-202ENST00000567704 A0A0G2JPF8 293 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 HNRNPCL3B7ZW38 293 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 H3BMQ9 156 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 DYRK3O43781 588 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 TPST2O60704 377 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR6A2O95222 327 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZNF806P0C7X5 589 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 HNRNPCL4P0DMR1 293 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 RPS3P23396 243 aaKnown RBP eCLIP12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC6A4P31645 630 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 C2orf80Q0P641 193 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 GANABQ14697 944 aaKnown RBP12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 ATP6AP1Q15904 470 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 ZNF730Q6ZMV8 503 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 TMEM192Q8IY95 271 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 LGI4Q8N135 537 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 MOSPD2Q8NHP6 518 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 GRIN3AQ8TCU5 1115 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 ING5Q8WYH8 240 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 UFD1Q92890 307 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 CRELD1Q96HD1 420 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 COG8Q96MW5 612 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 FCRL5Q96RD9 977 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 OR2B2Q9GZK3 357 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 KCNH4Q9UQ05 1017 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 PCDHGC4Q9Y5F7 938 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 ANKRD12Q6UB98 2062 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 TFAP2AP05549 437 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 SLC5A2P31639 672 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 EPHX2P34913 555 aa12.18□□□□□ -0.46
CSPG4P13-202ENST00000567704 FAUP35544 74 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms