RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 DHRS9Q9BPW9 319 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 CHID1Q9BWS9 393 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 FAM118AQ9NWS6 357 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 MARCH4Q9P2E8 410 aaPredicted RBP13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 OSGIN1Q9UJX0 560 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 PCDHB3Q9Y5E6 796 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 PCDHGA8Q9Y5G5 932 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 N6AMT1Q9Y5N5 214 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 MAU2Q9Y6X3 613 aa13.72□□□□□ -0.21
RABGGTA-220ENST00000560998 A0A0D9SEW6 157 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 OR51F1A6NGY5 319 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC1A7O00341 560 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 EFEMP2O95967 443 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 EPOP01588 193 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 FGF1P05230 155 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 HOXD9P28356 352 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 HTR1EP28566 365 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 CLK3P49761 638 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 MVKQ03426 396 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 ZIK1Q3SY52 487 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 AGAP9Q5VTM2 703 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 STEAP3Q658P3 488 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 ALG1LQ6GMV1 187 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 DESI1Q6ICB0 168 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 SLC8B1Q6J4K2 584 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 ZCCHC8Q6NZY4 707 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 PNCKQ6P2M8 343 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 LDB1Q86U70 411 aaPredicted RBP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 CCDC103Q8IW40 242 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 OR6F1Q8NGZ6 308 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 CEP295NLQ96MC4 621 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 MAGEH1Q9H213 219 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 TOR3AQ9H497 397 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 RETREG1Q9H6L5 497 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 WBP11Q9Y2W2 641 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 FIS1Q9Y3D6 152 aa13.71□□□□□ -0.21
RABGGTA-220ENST00000560998 NEMP2A6NFY4 417 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 H0Y626 953 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 H3BNC9 293 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 IPO13O94829 963 aaKnown RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 TRIM16O95361 564 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 GJB5O95377 273 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 APOA1P02647 267 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 IFNA8P32881 189 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 SLC11A2P49281 568 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 CDKN2DP55273 166 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 MRPS15P82914 257 aaKnown RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 FCHO2Q0JRZ9 810 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 IMPG1Q17R60 797 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 OTUD3Q5T2D3 398 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 SYT6Q5T7P8 510 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 CCDC81Q6ZN84 652 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 RNF135Q8IUD6 432 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 OR7D4Q8NG98 312 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 OR52K2Q8NGK3 314 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 MCFD2Q8NI22 146 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 PEX13Q92968 403 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 C19orf60Q96EN9 201 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 GPBP1L1Q9HC44 474 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 STMN3Q9NZ72 180 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 MAGEL2Q9UJ55 1249 aa13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 CAB39Q9Y376 341 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 ZFP37Q9Y6Q3 630 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-220ENST00000560998 AGAP5A6NIR3 686 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 UPK1AO00322 258 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 RBP1P09455 135 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 MTHFD1P11586 935 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 CAPN3P20807 821 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 PKLRP30613 574 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 RYKP34925 604 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 OR1D2P34982 312 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 UGT2B10P36537 528 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 NUDT1P36639 197 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 MRPL19P49406 292 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 TUFMP49411 452 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 CDH4P55283 916 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 LIPEQ05469 1076 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 GALNT3Q14435 633 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 DUSP7Q16829 419 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 ZFP69Q49AA0 526 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 CATSPEREQ5SY80 951 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 ATAD3CQ5T2N8 411 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 UBE2UQ5VVX9 321 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 TMEM236Q5W0B7 351 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 ZDHHC13Q8IUH4 622 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 PLD3Q8IV08 490 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 SVOPLQ8N434 492 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 BLOC1S5Q8TDH9 187 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 FBLIM1Q8WUP2 373 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 ANKRD49Q8WVL7 239 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 OVCA2Q8WZ82 227 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 SGCDQ92629 289 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 BIRC7Q96CA5 298 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 SCLYQ96I15 445 aa13.7□□□□□ -0.22
RABGGTA-220ENST00000560998 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms