RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 RAPH1Q70E73 1250 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CYS1Q717R9 158 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 RD3Q7Z3Z2 195 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 PIWIL4Q7Z3Z4 852 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 C11orf96Q7Z7L8 435 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SDCCAG8Q86SQ7 713 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 LONP2Q86WA8 852 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SPATS2Q86XZ4 545 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 TDRPQ86YL5 185 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 RAVER1Q8IY67 606 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 CENPLQ8N0S6 344 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 ANKRD42Q8N9B4 389 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 LMNTD1Q8N9Z9 388 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 OR2I1PQ8NGU4 316 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 MDM1Q8TC05 714 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CALML6Q8TD86 181 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 EXT2Q93063 718 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TSACCQ96A04 125 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 ULK4Q96C45 1275 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TLCD1Q96CP7 247 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 LINGO1Q96FE5 620 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 DCUN1D1Q96GG9 259 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SGSM3Q96HU1 749 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 VPS35Q96QK1 796 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SELENOSQ9BQE4 189 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CCDC77Q9BR77 488 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TMEM109Q9BVC6 243 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 C1QTNF1Q9BXJ1 281 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TEX101Q9BY14 249 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SLC13A1Q9BZW2 595 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 CLPBQ9H078 707 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 DUSP15Q9H1R2 295 aaPredicted RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 VIPAS39Q9H9C1 493 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TM9SF3Q9HD45 589 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 FAM86C1Q9NVL1 165 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 INTS10Q9NVR2 710 aaKnown RBP5.12□□□□□ -1.59
SPG11-220ENST00000559933 SLC24A2Q9UI40 661 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 GNPTGQ9UJJ9 305 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 ZNF180Q9UJW8 692 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 EMCNQ9ULC0 261 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 GRID1Q9ULK0 1009 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 SUFUQ9UMX1 484 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 IKBKGQ9Y6K9 419 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 GON4LQ3T8J9 2241 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 ZNF318Q5VUA4 2279 aa5.12□□□□□ -1.59
SPG11-220ENST00000559933 TMEM131Q92545 1883 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PIKFYVEQ9Y2I7 2098 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 A0A096LPK6 155 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 IQANK1A0A1B0GTG1 560 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 A0A1B0GVT2 93 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PRSS38A1L453 326 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PRAMEF27A3QJZ7 478 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 GOLGA6L10A6NI86 522 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 A6NNZ2 444 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PATE3B3GLJ2 98 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 E5RI56 91 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CACNB4O00305 520 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 CDC7O00311 574 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZBTB14O43829 449 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 NUAK1O60285 661 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 SDC3O75056 442 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CDK14O94921 469 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 RASGRP1O95267 797 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 WISP3O95389 354 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 EML2O95834 649 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 TSPAN12O95859 305 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 MT-ND3P03897 115 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 C2P06681 752 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 SNRPAP09012 282 aaKnown RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 CELA3AP09093 270 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 THEGLP0DJG4 465 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 STMN1P16949 149 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZNF7P17097 686 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 RPS3P23396 243 aaKnown RBP eCLIP5.11□□□□□ -1.59
SPG11-220ENST00000559933 CD27P26842 260 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 TYK2P29597 1187 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 OAS2P29728 719 aaKnown RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 PDHA2P29803 388 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 TRIM23P36406 574 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CCNFP41002 786 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 MAGEA12P43365 314 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PRLHRP49683 370 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 SERPINB9P50453 376 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CSRP3P50461 194 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 KIAA1024LP59773 190 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 RAB10P61026 200 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CCDC15Q0P6D6 951 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 BNIP3Q12983 259 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 C1orf61Q13536 156 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 FZD2Q14332 565 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CSHL1Q14406 222 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ITIH4Q14624 930 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 OR4D1Q15615 310 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ALG11Q2TAA5 492 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 C18orf21Q32NC0 220 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 GPR33Q49SQ1 333 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CCSMST1Q4G0I0 132 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZNF658BQ4V348 819 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 SYTL3Q4VX76 610 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms