RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 C2orf49Q9BVC5 232 aaPredicted RBP9.84□□□□□ -0.84
LRRC28-216ENST00000559819 SMG9Q9H0W8 520 aaKnown RBP9.84□□□□□ -0.84
LRRC28-216ENST00000559819 SMURF2Q9HAU4 748 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 IL21Q9HBE4 155 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 LRTM1Q9HBL6 345 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 CD320Q9NPF0 282 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 TUBA8Q9NY65 449 aaPredicted RBP9.84□□□□□ -0.84
LRRC28-216ENST00000559819 LIMD1Q9UGP4 676 aa9.84□□□□□ -0.84
LRRC28-216ENST00000559819 INTS6Q9UL03 887 aaKnown RBP9.84□□□□□ -0.84
LRRC28-216ENST00000559819 DYTNA2CJ06 578 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 TRIM64A6NGJ6 449 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 NOBOXO60393 691 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ULK1O75385 1050 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ATE1O95260 518 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ALBP02768 609 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 GSNP06396 782 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 RAP2AP10114 183 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 EPORP19235 508 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 NEK2P51955 445 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 EMP3P54852 163 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 PHC1P78364 1004 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 DAG1Q14118 895 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 MAPKAPK3Q16644 382 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ZXDCQ2QGD7 858 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-216ENST00000559819 SULT1C3Q6IMI6 304 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 RETSATQ6NUM9 610 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CRTC1Q6UUV9 634 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 GPR180Q86V85 440 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 HS6ST3Q8IZP7 471 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 NXPE1Q8N323 547 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ZNF548Q8NEK5 533 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-216ENST00000559819 OR8J3Q8NGG0 315 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 OR10Q1Q8NGQ4 319 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 PXYLP1Q8TE99 480 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 SLC22A17Q8WUG5 538 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 SGCDQ92629 289 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 EZH1Q92800 747 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-216ENST00000559819 VOPP1Q96AW1 172 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CFAP97Q9P2B7 532 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 IFT80Q9P2H3 777 aaPredicted RBP9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ADGRE2Q9UHX3 823 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 INSL5Q9Y5Q6 135 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 SLC28A1O00337 649 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 PITPNM1O00562 1244 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CLGNO14967 610 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 PDYNP01213 254 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 C1QCP02747 245 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 PGRP06401 933 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 C7P10643 843 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CA8P35219 290 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 GNPDA1P46926 289 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 GALK1P51570 392 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 B4GALNT1Q00973 533 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CHRNB3Q05901 458 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CRY1Q16526 586 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 FAM98BQ52LJ0 330 aaKnown RBP9.83□□□□□ -0.84
LRRC28-216ENST00000559819 TPGS2Q68CL5 300 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 MACC1Q6ZN28 852 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ANKRD46Q86W74 232 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ALDH16A1Q8IZ83 802 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 SLC22A15Q8IZD6 547 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CLEC4FQ8N1N0 589 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 FAM162AQ96A26 154 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 ACPTQ9BZG2 426 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 HIPK3Q9H422 1215 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CXorf21Q9HAI6 301 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 TIMMDC1Q9NPL8 285 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 TMEM45AQ9NWC5 275 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 DLGAP4Q9Y2H0 992 aa9.83□□□□□ -0.84
LRRC28-216ENST00000559819 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-216ENST00000559819 TULP3O75386 442 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-216ENST00000559819 STK16O75716 305 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 CKMP06732 381 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 BCKDHAP12694 445 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 EPB42P16452 691 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 MSH3P20585 1137 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 GABRR2P28476 465 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 AKT1P31749 480 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 CCR7P32248 378 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 ALDH3A2P51648 485 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 EPHB3P54753 998 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 ATP13A5Q4VNC0 1218 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 LRRC23Q53EV4 343 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-216ENST00000559819 USP39Q53GS9 565 aaKnown RBP9.82□□□□□ -0.84
LRRC28-216ENST00000559819 CACHD1Q5VU97 1274 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 LRRC66Q68CR7 880 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 GCNT7Q6ZNI0 430 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 RNF175Q8N4F7 328 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 ADAMTS16Q8TE57 1224 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 SKA2Q8WVK7 121 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-216ENST00000559819 NCLNQ969V3 563 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 PYCR2Q96C36 320 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 SLC47A1Q96FL8 570 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 INPP5KQ9BT40 448 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 ATP13A3Q9H7F0 1226 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 HPS4Q9NQG7 708 aa9.82□□□□□ -0.84
LRRC28-216ENST00000559819 C8orf4Q9NR00 106 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms