RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KLK3P07288 261 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 PGAM1P18669 254 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 POLR2CP19387 275 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 OGNP20774 298 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 CDH3P22223 829 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 RPS3P23396 243 aaKnown RBP eCLIP4.25□□□□□ -1.73
SNX1-205ENST00000559339 PRDX3P30048 256 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 FMO4P31512 558 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CCR7P32248 378 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CCNFP41002 786 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ETV5P41161 510 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ARCN1P48444 511 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 CSE1LP55060 971 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 ETF1P62495 437 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 TUBB4BP68371 445 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 RHDQ02161 417 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ABRQ12979 859 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CALCOCO2Q13137 446 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CLN3Q13286 438 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 PTK6Q13882 451 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TUBB2AQ13885 445 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 MORF4L2Q15014 288 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 HIF1AQ16665 826 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TYSND1Q2T9J0 566 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.25□□□□□ -1.73
SNX1-205ENST00000559339 ANKRD20A4Q4UJ75 823 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TAF1BQ53T94 588 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 PLEKHS1Q5SXH7 462 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 RNASEH2BQ5TBB1 312 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 ARHGAP40Q5TG30 622 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 IZUMO3Q5VZ72 239 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ZNF470Q6ECI4 717 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 UGT3A1Q6NUS8 523 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 DUS1LQ6P1R4 473 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 INO80CQ6PI98 192 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 CES3Q6UWW8 571 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 UNC5DQ6UXZ4 953 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ZNF534Q76KX8 674 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 LDB1Q86U70 411 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 CAND1Q86VP6 1230 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 DTX1Q86Y01 620 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CREG2Q8IUH2 290 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 DCUN1D3Q8IWE4 304 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SLC22A15Q8IZD6 547 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CACNA2D3Q8IZS8 1091 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 LILRA3Q8N6C8 439 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 BMPERQ8N8U9 685 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 NAT8LQ8N9F0 302 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.25□□□□□ -1.73
SNX1-205ENST00000559339 PHC3Q8NDX5 983 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 OR52E1Q8NGJ3 308 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 OR5AR1Q8NGP9 310 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 GPR150Q8NGU9 434 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 OR8K5Q8NH50 307 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CFAP61Q8NHU2 1237 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 JPH3Q8WXH2 748 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 KLHL6Q8WZ60 621 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 KCNJ9Q92806 393 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ZNF669Q96BR6 464 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 LRRC39Q96DD0 335 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TRIM44Q96DX7 344 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 STAMBPL1Q96FJ0 436 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ELMO2Q96JJ3 720 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SLC41A2Q96JW4 573 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 RMDN2Q96LZ7 410 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 FCRL4Q96PJ5 515 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 UBL7Q96S82 380 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 MAP3K3Q99759 626 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CTRCQ99895 268 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 ARHGAP9Q9BRR9 750 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 HGH1Q9BTY7 390 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TUBB2BQ9BVA1 445 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 RAB11FIP5Q9BXF6 653 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SLC7A5P2Q9GIP4 190 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 GPN2Q9H9Y4 310 aaPredicted RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 CPNE5Q9HCH3 593 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SYTL2Q9HCH5 934 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 LATS2Q9NRM7 1088 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 FAM114A2Q9NRY5 505 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 C1GALT1Q9NS00 363 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 FGF21Q9NSA1 209 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 KCND1Q9NSA2 647 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 OGFRQ9NZT2 677 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 FOXJ2Q9P0K8 574 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 LNPEPQ9UIQ6 1025 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SERTAD3Q9UJW9 196 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 KCND3Q9UK17 655 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 PILRAQ9UKJ1 303 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 RARRES3Q9UL19 164 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 SLC39A10Q9ULF5 831 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 PYCARDQ9ULZ3 195 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 CRYL1Q9Y2S2 319 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 TDRKHQ9Y2W6 561 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 UTP11Q9Y3A2 253 aaKnown RBP4.25□□□□□ -1.73
SNX1-205ENST00000559339 NEU2Q9Y3R4 380 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 PCDHB3Q9Y5E6 796 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 COMMD10Q9Y6G5 202 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 PRSS21Q9Y6M0 314 aa4.25□□□□□ -1.73
SNX1-205ENST00000559339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
SNX1-205ENST00000559339 AHCTF1Q8WYP5 2266 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms